Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01771 ATGGTTGCATTCTCCCTCTTCATCTTCTGTTCCTTAATTCTCCTCGTCCAGCCGTCTTTTTCCTCCACGCAGTCCCCCAATCTCGACCCTGACAGCATCGACCTCTTCGGCGACGCCCACGTTGTCACCAACAACGACGCCGCCCCCCACGTGCGCCTCACCAACCCCTCCCTTTCTTCCTCCGGTCTCCTCCGCGTCCCCGAGCCTCTCGTCTTCGTCGACGCCACTACTACCCTCTCCACCGAATTCTCCTTCTCCATCTCCGGCAATGGTGACGGCGTACTGTTTGTCCTCACCGCCGCTTCCGCCAACGGTTCGGATACCGTCGCCGTTGAGTTCGTCACGTCCAAGGATGAAAATGTAGGAGACACCAACTCGAGCCACGTTGGCATCGATGTCGGAAGCCACCTGTCCCTGGCTGTTGCGAATGCTTCCGATGTGGGTCTGGTTCTCAATAATGGGGAAAAGTTGAATGCTTGGGTTGATTACGAAGGTGGGCCTAAGGTGATGGAAGTTAGGTTAAGCAAATGGGGTGAACAAAAGCCTTCTGATCCCATCGTTTCTCATAAGATTGACTTTCCTAAAATGTGGGGTGGGAATTCTGTGTTCGCGGGTATAACTTCTTCCAACGGTGGCCATTCGCTGCAGGTTGTGAGTATCTATTCGTGGAAGCTTACATTGAAGAAAGTTTCAAATGGGTTGCATTCTCTTCCTGTGGATCCGCATGGTTTATCTGAGGATGAGCATAGGAGAGTTTGTCCTTTGACGATTCTTGCTGGGGTGATTTTTGGAACTGGGTGTCTTGCGTTGGTGACGTTTGTGGTGCTGTTTATGTGGGTGATTTTCTTCCAAAAGGGTGCGGAGGAGTCTCTTGCGAGAATCCCCGATCACCCTTCGGATATCAGGTATGAAAGAATTGATGTGGCTGTTGACAAGAATGCGCAGGACGATGAGAGTTAG 960 0.5177 MVAFSLFIFCSLILLVQPSFSSTQSPNLDPDSIDLFGDAHVVTNNDAAPHVRLTNPSLSSSGLLRVPEPLVFVDATTTLSTEFSFSISGNGDGVLFVLTAASANGSDTVAVEFVTSKDENVGDTNSSHVGIDVGSHLSLAVANASDVGLVLNNGEKLNAWVDYEGGPKVMEVRLSKWGEQKPSDPIVSHKIDFPKMWGGNSVFAGITSSNGGHSLQVVSIYSWKLTLKKVSNGLHSLPVDPHGLSEDEHRRVCPLTILAGVIFGTGCLALVTFVVLFMWVIFFQKGAEESLARIPDHPSDIRYERIDVAVDKNAQDDES 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01771 319 Pfam Legume lectin domain 31 232 IPR001220 GO:0030246
Vimu6g01771 319 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 16 309 - -
Vimu6g01771 319 Gene3D - 17 229 - -
Vimu6g01771 319 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 227 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01771 Vimu-Chr6 16061707 16063409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01771 37 311 Receptor kinase-like Gene Family AT5G03140 25.382 5.62e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01771 - - vra:106757171 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01771 6 16061707 16063409 Vimu6g01771 6 16061707 16063409 ECH