Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01764 ATGATCGGCGTCGGAAAGGCCAAGCAGTACGGTAACGTCCTCGACAAGCCCCTCGCCAAGGGCAAGCAAGAGGTTAGCTTGAGTGCATTCGCGTTCTTGTTTTCAGAGCTTGTTCAGTACAACCAAACGCAGGTCGATAATATTGGGGAACTCGAAAGAAGACTGGAGGATGCTGGATATGCGGTTGGGGCACGAGTTCTTGAGCTGCTTTGCCACAGAGATAAGCTTCCTCTCTTTCAAGGATTTATCACTTTGGATGGCTTAAAACTATGCATGGGTATTATATTTCGATCCATGAGCCTGTGCTTGGAGTCTTGGACTCGTAAGTTGGAAACAGAAGAGAGACACGGCTGTTGGGTATTCTTTCTTTTGTACACAGTACAGTGTGGAAAGTACTATTTGGAAAGCATGCTGGGTTGGGTTGATCATCATCATGTCATGTTTACTTGTTTATACAAAGAATCACCAATCATTGATGAAACGTTGGTTCTTAACGAACCTGTATATTTTAGTCATGTGTTCTACATCATGATTTCCAATGTGTCTTTTGGAAATTCTTATGTAGCTGATTCACTGGAGAAAGGAACCGAACATGAAGATGAATACATGATTAGTGAAAAAGAGCTTCTAGTAAACAAATTCATTTCTATCCCAAAGGACATGGGGACGTTTAACTGTGGAGCATTTGTTGCTGGAATAGTACGGGGCGTTTTGGACGGTGCCGGATTTCCGGCTGTTGTAACTGCGCATTTTGTGCCTATGGAAGGTCAACAACGACCACGGACGACAATTTTGATAAAATTTGCTGAAGAGGTGCTACAAAGAGAAGCAAGATTAGGCTGA 843 0.4318 MIGVGKAKQYGNVLDKPLAKGKQEVSLSAFAFLFSELVQYNQTQVDNIGELERRLEDAGYAVGARVLELLCHRDKLPLFQGFITLDGLKLCMGIIFRSMSLCLESWTRKLETEERHGCWVFFLLYTVQCGKYYLESMLGWVDHHHVMFTCLYKESPIIDETLVLNEPVYFSHVFYIMISNVSFGNSYVADSLEKGTEHEDEYMISEKELLVNKFISIPKDMGTFNCGAFVAGIVRGVLDGAGFPAVVTAHFVPMEGQQRPRTTILIKFAEEVLQREARLG 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01764 280 CDD TRAPPC5_Trs31 25 268 IPR016696 GO:0030008|GO:0048193
Vimu6g01764 280 Pfam Transport protein particle (TRAPP) component 30 268 IPR007194 -
Vimu6g01764 280 PIRSF TRAPP_1_Trs31 4 280 IPR016696 GO:0030008|GO:0048193
Vimu6g01764 280 SUPERFAMILY Ligand-binding domain in the NO signalling and Golgi transport 23 78 IPR024096 -
Vimu6g01764 280 SUPERFAMILY Ligand-binding domain in the NO signalling and Golgi transport 188 278 IPR024096 -
Vimu6g01764 280 Gene3D Trafficking protein particle complex subunit 3 181 280 - -
Vimu6g01764 280 Gene3D Trafficking protein particle complex subunit 3 23 113 - -
Vimu6g01764 280 PANTHER 41-2 PROTEIN ANTIGEN-RELATED 4 76 IPR016696 GO:0030008|GO:0048193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01764 K20280 - mnt:21388907 281.182