Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01756 ATGGCGTCATCGCGTCCACCACCGTCGAAATCAGTGGATCTAGACCTCACCATCGTGGCGGCGAAGCACCTCAAGAACGTCAACTGGAAGAACGGCGATCTCAAGCCCTACGTCGTTTTCTGGGTGGACCCCGAGCGGCGTCTGGCCACCAAATCCGACGACTCCGGCAACACCTCCCCCGTCTGGAACGAGCGCTTCGCCCTACCCCTCCCTCTCCCCCTCCACGACTCCTTCCTCACCCTGGAGATCTTCCACTCCAAACCCTCTGACACCCTCAAACCCCTCGTCGCCACCCTCCGCCTCCCTCTCAAGGACCTCCACGACCTCCAGGACTCCACGCGCCTCCGGGGATATTCCCATTCCCCTTCTCCACCACCATCTCCATACCCCTCGTACCCCTCTTACCCCGATTCTTATAGTTCTTCTTACTACCCTGGTTACTATTCTGGTGCTCTTCCTCCTCCTCCTCCGAGACCCTTCATCGACCGTTACGCTGGGACCAGCGGTCCTTCCGCTCCGCTTGATTATTCCACCTCCTACGATCCCAAGCCCAGGCCTTCCAAAATGGGCCTAGGTGCTGGCCTCGCTGTCGGCGCTGTTGCTGGAGCTCTCGGTGGGCTTGCTCTCGAAGAGGGGCTTAAATACGAAGAAGACAAAATCGCGGACAGGGTCGAGAACGACGTCGCTGCTAGTATTGCGCGCGACGATTACAGCGATTATCGAGTGGATTACTGA 735 0.5878 MASSRPPPSKSVDLDLTIVAAKHLKNVNWKNGDLKPYVVFWVDPERRLATKSDDSGNTSPVWNERFALPLPLPLHDSFLTLEIFHSKPSDTLKPLVATLRLPLKDLHDLQDSTRLRGYSHSPSPPPSPYPSYPSYPDSYSSSYYPGYYSGALPPPPPRPFIDRYAGTSGPSAPLDYSTSYDPKPRPSKMGLGAGLAVGAVAGALGGLALEEGLKYEEDKIADRVENDVAASIARDDYSDYRVDY 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01756 244 Pfam C2 domain 13 109 IPR000008 -
Vimu6g01756 244 CDD C2_SRC2_like 13 106 IPR044750 GO:0006952
Vimu6g01756 244 ProSiteProfiles C2 domain profile. 1 119 IPR000008 -
Vimu6g01756 244 MobiDBLite consensus disorder prediction 112 134 - -
Vimu6g01756 244 Gene3D C2 domain 2 125 IPR035892 -
Vimu6g01756 244 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 110 IPR035892 -
Vimu6g01756 244 SMART C2_3c 13 115 IPR000008 -
Vimu6g01756 244 PANTHER INGRESSION PROTEIN FIC1 14 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01756 Vimu-Chr6 15963922 15964827 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01756 - - gmx:102666594 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01756 6 15963922 15964827 Vimu6g01756 6 15963922 15964827 ECH