Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01743 ATGTCTCTTACTTCCTCCACTCCTGCAAATGCCTCTCTATCTTTCTCCCGGCGCTTGGTTCCCCCCGGAAGCCGTTTTTCTCCGGTTGCACTCACTGGCATATCCTTCTCACGCGCTCCTTTCACGTTGAGGTGCTCTTCCCTAAAAAATTCTTCCCATCGAACAAAGTTTGCAGAGGCTGCAAAGAAGGCGAACTTGATTCCTCTTTATCAGTGCATTTTCTCCGACCACCTTACCCCGGTCGTTGCTCACCAGATTTTGCTTGAAGATGATGACAGGGAGGCTCCAAGCTTTCTCTTTGAGTCTGATGAATTAAGTTGTGATGTGGGTCGCTATAGTGTTGTTGGAGCTTATCCTGCAATGGAGGTTCTGGCAAAAGAAAACAAGGTTGCGATTATTGACCATGTAACTGGAACTTTATCTGATAAAACGGTTGATGATCCTATCATGGTTCCGAAAGAAATCTCAGAGGGTTGGAAACCCTATCTCACAGATGAACTTCCTGATGCATTTTGTGGTGGTTGGGCAGGTTTTTTCTCATACGATACAGTTCGTTACGTGGAAAAGAAAAAACTATCATTTTCAAATGCTCCATCGAATGATAAGAACTTTTGGGACATGCATCTGGGCCTCTACGAGAGTGTCATTGTGTTTGACCATGTCGAAAAGAAAGCATATTTGATTCAATGGGTGAGGATTGATCGCTACTCCACGGTTGAGAGTGCTTACAATGATGGAATGAAAAAATTAGAAAAATTAGCTGCCAAATTACAAGAATTTAAAGCTCGAAGGCTGGAGCCAGGCTTTGTGGATTTACACACTCACCATTTTGGTCCACCTTTGAAGAAGTCGAGCATGACAACTGAAGCATACAAGGAAGCAGTCCTTCGGGCCAAAGAACACATTAATGCAGGGGATATTTTCCAGATTGTGTTAAGTCAGAGATTTGAACGAAGAACATTTGCCGATCCATTTGAAATTTACAGAGCACTGAGAGTTGTGAACCCAAGTCCATATATGGCCTATTTGCAGGCTAGGGGGTGTATTCTGGTTGCTTCAAGTCCAGAGATTCTTACTCGTATAAAGAAGAATAAGATTGTGAATCGTCCTTTGGCTGGGACAACCAGAAGGGGAAATACACCTGAAGAAGACGCGAGGTTAGAAGAAATGCTACTGAAAGACGAAAAGCAACGTGCAGAGCATGTAATGTTGGTTGATTTGGGACGCAATGATGTTGGAAAGGTTGCAAAATCTGGTTCTGTGAAAGTGGAGAAACTTATGGATATCGAACGATATTCCCATGTCATGCACATAAGCTCAACGATAACGGGAGAGATGCAAGAAGATTTGAGTTGCTGGGATGTGCTGCGTTCTGCATTGCCGGTTGGAACCGTGAGTGGAGCACCAAAGGTGAAGGCCATGGAGTTGATCGATAAGATGGAGGTGACAAGGAGAGGGCCCTACGGTGGAGGATTTGGATACATATCTTTCTCTGGGGATATGGACATTGCCCTTGCTCTAAGGACAATGGTAATTCCGACAATAACGTATGACCGAAACCTCGACCAACGTAAACGTCAGGAGTGGGTTGCTTATCTTCAAGCTGGTGCTGGTATTGTTGCTGATAGTGTTCCTGCCGATGAGTACCAAGAGTGTCAGAACAAAGCTGCTGCTCTTGCTCGTGCTATTGACTTGGCTGAGTCAGCTTTTGTTCATCATGGAATTCAAACATCTCCTCAATAA 1743 0.4435 MSLTSSTPANASLSFSRRLVPPGSRFSPVALTGISFSRAPFTLRCSSLKNSSHRTKFAEAAKKANLIPLYQCIFSDHLTPVVAHQILLEDDDREAPSFLFESDELSCDVGRYSVVGAYPAMEVLAKENKVAIIDHVTGTLSDKTVDDPIMVPKEISEGWKPYLTDELPDAFCGGWAGFFSYDTVRYVEKKKLSFSNAPSNDKNFWDMHLGLYESVIVFDHVEKKAYLIQWVRIDRYSTVESAYNDGMKKLEKLAAKLQEFKARRLEPGFVDLHTHHFGPPLKKSSMTTEAYKEAVLRAKEHINAGDIFQIVLSQRFERRTFADPFEIYRALRVVNPSPYMAYLQARGCILVASSPEILTRIKKNKIVNRPLAGTTRRGNTPEEDARLEEMLLKDEKQRAEHVMLVDLGRNDVGKVAKSGSVKVEKLMDIERYSHVMHISSTITGEMQEDLSCWDVLRSALPVGTVSGAPKVKAMELIDKMEVTRRGPYGGGFGYISFSGDMDIALALRTMVIPTITYDRNLDQRKRQEWVAYLQAGAGIVADSVPADEYQECQNKAAALARAIDLAESAFVHHGIQTSPQ 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01743 580 NCBIfam anthranilate synthase component I 75 564 IPR005256 GO:0000162|GO:0004049
Vimu6g01743 580 Pfam chorismate binding enzyme 289 555 IPR015890 -
Vimu6g01743 580 Gene3D Anthranilate synthase 44 572 IPR005801 GO:0009058
Vimu6g01743 580 PRINTS Anthranilate synthase component I signature 403 416 IPR019999 GO:0009058
Vimu6g01743 580 PRINTS Anthranilate synthase component I signature 483 497 IPR019999 GO:0009058
Vimu6g01743 580 PRINTS Anthranilate synthase component I signature 498 512 IPR019999 GO:0009058
Vimu6g01743 580 PRINTS Anthranilate synthase component I signature 389 402 IPR019999 GO:0009058
Vimu6g01743 580 PANTHER AMINOBENZOATE/ANTHRANILATE SYNTHASE 51 573 IPR019999 GO:0009058
Vimu6g01743 580 Pfam Anthranilate synthase component I, N terminal region 93 227 IPR006805 GO:0009058
Vimu6g01743 580 FunFam Anthranilate synthase component 1 44 571 - -
Vimu6g01743 580 Coils Coil 549 569 - -
Vimu6g01743 580 Coils Coil 243 263 - -
Vimu6g01743 580 SUPERFAMILY ADC synthase 64 567 IPR005801 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01743 Vimu-Chr6 15851903 15857109 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01743 K01657 - gmx:100790900 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01743 6 15851903 15857109 Vimu6g01743 6 15851903 15857109 ECH