Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01731 ATGGCCTGGTTATGGCGCGCAGGTGCCAAGTTCTCTCTGGTTGCCTCCGCCGTTGGCGGCGGAGTCACCACGGCGCTCATTGCCACTTCCGACGACCCCGAGACGGCTCTAAAGCTTTGCGCCACCGTCCCACATCGCCTCTTCCGCGACGCGGTCACGGCTGCTAACATTGCTTTCGATTATGAATATTCACTGTGGGGACTGCCGGAAGGGAGTATTGAGAGGGAGAGAATCAAGCATGAAGTTCACCTCAGGTCAGCACAAAAGCTTCAAGACCTTTGTTTTAAGAATGGAGGGGTTTATATAAAGCTTGGGCAACATCTTGGGCAATTGGAATATTTAGTTCCCCAGGAATATGTTCAGACAATGAGGGAATCTATGCTAAATAAATGTCCAGTTTCTTCCTATGAGCAAGTATGCAACGTATTCAAGAAAGAGCTTGGTGATACTCCAGATAAAATATTTTCTGAGTTTGATCCGATTCCAATAGCAAGTGCTTCCCTTGCACAAGTTCATGTAGCTCGCATGCATGATGGACAAAAAGTTGCTGTCAAGGTTCAGCATACTCACATGACTGATACAGCAGCTGCTGATCATGCCACTGTGGAATTGGTTGTAAACACATTGCACAGATTTTTTCCCAGTTTTGATTATAGGTGGTTGATTGATGAGATTAGCGAAAGTTTGCCCAAGGCAAGTTACTATTTAACTCTGAAGCAATATGAATTAGATTTTTTAACTGAGGCAAAGAACAGTGAGAGGTGTTTGGATAACTTCCACAAACTGTCTCCTCATATTGCAAATTATGTATATGCACCAAAAGTATATTGGAACCTGAGTACCTCGAAGCTCCTGACAATGGAATTCATGGACGGTGCTTATGTAAATGATGTAAAAACCATTCAGAAACTTGGGATCAATTTGCATGAACTTTCAACATTGGTTAGTCAAACTTTTGCTGAAATGATGTTCAAGCATGGGTTTGTGCATTGTGATCCTCATGCTGCTAACTTGTTGGTGCGCCCATTGCCTTCCAGTAAAGCTAGCATTTGGGGCAGGAGAAAACCACAATTGATCCTTTTAGACCATGGACTCTATAAAGAGCTTGACTTCCAAACAAGAACTAACTATGCTTCACTATGGAAGGGGCTGGTATTTGCTGATGCTAATGCAATCAAAGAATATAGTGCAAAGTTGGGAGCTGGGGAGGATTTATATGCACTCTTTGCTGGAGTTCTAACGATGAGGCCGTGGAATAGAGTTGTTGACCCATCTATGGATCATTTAGTTATACAGGGAAATGAGAGTGAACGATTAGAACTGCAGATGTACGCATCTCAATATTTCCATCAAATCTCTGAGCTTTTAAGGCGATTACCGCGTGTGATTCTGCTAATGCTAAAGACAAATGATTGTTTACGAGCGGTCAATAATTCTCTGTTACAGGGATCATCTTTGGAGACTTTTTTTATCATTGGAAAGGTTTCTTCGGAGGCTGTCATTGAAGCAAAGATGTTGAAAAGCAAATCACTTTTAACATGGTTAAACGTTAAATTGGATAAGATTTTGCTAGAAGTACGACTCTGGGGGATGCAGGTGGCCTTGTGGCTTTTACAACTAAGAAAGGCTTTGTCTTGGTCTAACCAACCATTTTAG 1656 0.4239 MAWLWRAGAKFSLVASAVGGGVTTALIATSDDPETALKLCATVPHRLFRDAVTAANIAFDYEYSLWGLPEGSIERERIKHEVHLRSAQKLQDLCFKNGGVYIKLGQHLGQLEYLVPQEYVQTMRESMLNKCPVSSYEQVCNVFKKELGDTPDKIFSEFDPIPIASASLAQVHVARMHDGQKVAVKVQHTHMTDTAAADHATVELVVNTLHRFFPSFDYRWLIDEISESLPKASYYLTLKQYELDFLTEAKNSERCLDNFHKLSPHIANYVYAPKVYWNLSTSKLLTMEFMDGAYVNDVKTIQKLGINLHELSTLVSQTFAEMMFKHGFVHCDPHAANLLVRPLPSSKASIWGRRKPQLILLDHGLYKELDFQTRTNYASLWKGLVFADANAIKEYSAKLGAGEDLYALFAGVLTMRPWNRVVDPSMDHLVIQGNESERLELQMYASQYFHQISELLRRLPRVILLMLKTNDCLRAVNNSLLQGSSLETFFIIGKVSSEAVIEAKMLKSKSLLTWLNVKLDKILLEVRLWGMQVALWLLQLRKALSWSNQPF 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01731 551 CDD ADCK1-like 126 400 IPR045307 -
Vimu6g01731 551 PANTHER ABC1 FAMILY PROTEIN 26 498 - -
Vimu6g01731 551 SUPERFAMILY Protein kinase-like (PK-like) 132 341 IPR011009 -
Vimu6g01731 551 Pfam ABC1 atypical kinase-like domain 127 395 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01731 Vimu-Chr6 15769189 15776905 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01731 K08869 - gmx:100796182 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01731 6 15769189 15776905 Vimu6g01731 6 15769189 15776905 ECH