Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01727 ATGAAAAATGACAAAACCATTTATAACTATAACCAAACAACCTTTGATTTGTTGGGTTTAGGACATGAGAAATACAAAGTCTTCCGGTGCAAACACTCACTCCTCTCTTCTATACCCGACTTCTCATATTTTATATCCTTCCATTCTATTTTTCTTTTTTCTCTCATTCTTAATCTGAACCTCACAGACATGGTTGCACCTGCCAGACCTCAGTTTGTTCTCTTCGGATCCTCCATCGTTCAGCTTAGTTTCGGCCATGGCGGTTGGGGCGCCCATCTTTCTGACATCTACGCTCGTAAGGCTGACATATTGTTGCGAGGATACTACGGATGGAACTCTCGACGTGCCCTCCAAGTGCTGGATCAAGTTTTCCCAAAGGATGCTGCAACCCAGCCTTCTCTTGTGATAGTTTATTTTGGAGGTAATGATTCCATGGGCCCTCATTTTTCTGGCCTAGGCCCTCATGTTCCTCTTCACGAATATATTGAAAACATGAGAAAGATTCTGATTCATATTCAGGGTCTTTCTGAAAGGACACGGATCATCGTTCTCAGTTGTCCTCCTGTCAATGAGGAAAAAGTGCGTGGAAACACTAGTGGAGTTCTTAGTGAGCTGGTAAGAACGAATGAATTGTGCCAAAGCTATTCAGAAGCTTGTATTAAGCTATGCAAGGAACTGGATGTCAAAGTTGTTGATCTTTTTAATGCATTACAGAAGAGAGATGACTGGAGGAATGCTTGTTTTACTGATGGTATCCATTTAGCAGCGGAGGGAAGCAAAATAGTGGTGAAAGAGATACTGAACGTGCTTAAGGAGGCTGACTGGGAGCCATGCCTCCACTGGAAATCTTTGTCCACTGAATTTGCAGAAGACTCACCATATGATCTGGTTGCTGCTGATGGCAAAACTACATTGAATCCTTCTGAGTGGACTTTTTACCGAGAGATTCAGTGGGATTAG 960 0.4281 MKNDKTIYNYNQTTFDLLGLGHEKYKVFRCKHSLLSSIPDFSYFISFHSIFLFSLILNLNLTDMVAPARPQFVLFGSSIVQLSFGHGGWGAHLSDIYARKADILLRGYYGWNSRRALQVLDQVFPKDAATQPSLVIVYFGGNDSMGPHFSGLGPHVPLHEYIENMRKILIHIQGLSERTRIIVLSCPPVNEEKVRGNTSGVLSELVRTNELCQSYSEACIKLCKELDVKVVDLFNALQKRDDWRNACFTDGIHLAAEGSKIVVKEILNVLKEADWEPCLHWKSLSTEFAEDSPYDLVAADGKTTLNPSEWTFYREIQWD 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01727 319 SUPERFAMILY SGNH hydrolase 64 271 - -
Vimu6g01727 319 Gene3D SGNH hydrolase 69 298 IPR036514 -
Vimu6g01727 319 CDD Isoamyl_acetate_hydrolase_like 71 270 - -
Vimu6g01727 319 FunFam isoamyl acetate-hydrolyzing esterase 1 homolog 69 301 - -
Vimu6g01727 319 Pfam GDSL-like Lipase/Acylhydrolase family 74 260 IPR013830 -
Vimu6g01727 319 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 62 319 IPR045136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01727 Vimu-Chr6 15750067 15757501 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01727 K23978 - gmx:100803959 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01727 6 15750067 15757501 Vimu6g01727 6 15750067 15757501 ECH