Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01711 ATGGCTGAATCACTAACAAACCCCAATGGCGGAGCTAAATTGTCTGGTGTCACCCATCATGCAATCTCCCACGAGCATTGTGTAATGCTTGCCACTCCAGTTTTTATGATGCTTGTGAATTTGTCGAGACTCACTTTAGCACTTCATTCATGTATAGTTATTGCTGTAGACCTTTTTAACTGGTTTCTCTGGAAAAGAAAAATTATTGCTCATATTGGCTCTTCCTGCCCTCTTTCACAGTTAAAATTTGGTGTTCTTTTTCTACAGGTTCGACCACTGGGAGTTACTTCCTTCCGACTCAGAGCTGCAAATTTTCAGAAAAGACCAATTTCTGGCAGTCCAATTCCTTGTCCTTTACCTACTCGTCGCAAGATTTGTATAGCATTTATCTTCATGTCACGTGGATTTAATTTCATGTCTTTGCTTGGATTGATCATGTTTAAGGGGACAGAAGTGGAATTTTCTCTTCTTAAGCATCAAGTTTCATGCAAACTCACCGATGTGGGAAATGATTCATGCTCATCAAAGGAGTATGGAAAGAGTCAACCTTTGGTTAAGATGTGTGGCATTACATCAGCTAAAGATGCTGCAATGGCAGCTGAAGCTGGTGCAAATTTAATTGGAATGATTATCTGGCCTAACTCAAAACGTTCTGTTTCTCTTTCGGTTGCAAAGGAGATATCGAAGGTTGCAAGAGATCATGGGGCAGAGCCTGTGGGTGTATTTGTGGATGATGATTCAGAAACAATTCTAAGAGCTTCTGATGCGGCAAACCTTGAATTTGTGCAGCTTCATGGACACGGTTCTCGGTTAGCTTTCCCATCTTTAATTCAGGAAAATCGTGTAATATATGTTCTCCATGCAAAGGACGATGGGAGTCTTTTGAACACTATTTCTCAGGAAGAGTGTTCTCTAGTTGATTGGGTCCTTGTTGACAGTGCACAAGGTGGCAGTGGAAAAGCATTCGAGTGGGCTCGGTTAAAACTACCAAAAATTAAAAGCAAGTACGGGTGGCTCTTGGCCGGTGGGATCAATCCTGAGAATGTTTCAGAGGCTCTATCTACTCTCAAGCCTGAAGGGGTGGATGTCAGCAGTGGCATTTGTGCATCAGATGGCATCCGTAAAGATCAATCAAGAATAGTTTCTTTCATGAATGCAGTAAATTCTTTTGAGTGTTGA 1179 0.4165 MAESLTNPNGGAKLSGVTHHAISHEHCVMLATPVFMMLVNLSRLTLALHSCIVIAVDLFNWFLWKRKIIAHIGSSCPLSQLKFGVLFLQVRPLGVTSFRLRAANFQKRPISGSPIPCPLPTRRKICIAFIFMSRGFNFMSLLGLIMFKGTEVEFSLLKHQVSCKLTDVGNDSCSSKEYGKSQPLVKMCGITSAKDAAMAAEAGANLIGMIIWPNSKRSVSLSVAKEISKVARDHGAEPVGVFVDDDSETILRASDAANLEFVQLHGHGSRLAFPSLIQENRVIYVLHAKDDGSLLNTISQEECSLVDWVLVDSAQGGSGKAFEWARLKLPKIKSKYGWLLAGGINPENVSEALSTLKPEGVDVSSGICASDGIRKDQSRIVSFMNAVNSFEC 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01711 392 SUPERFAMILY Ribulose-phoshate binding barrel 184 388 IPR011060 -
Vimu6g01711 392 Hamap N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 183 390 IPR001240 GO:0004640|GO:0006568
Vimu6g01711 392 PANTHER N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE 158 390 IPR044643 GO:0000162|GO:0004640
Vimu6g01711 392 CDD PRAI 185 387 IPR001240 GO:0004640|GO:0006568
Vimu6g01711 392 Gene3D Aldolase class I 182 391 IPR013785 -
Vimu6g01711 392 Pfam N-(5'phosphoribosyl)anthranilate (PRA) isomerase 185 385 IPR001240 GO:0004640|GO:0006568
Vimu6g01711 392 FunFam Tryptophan biosynthesis protein TRP1 183 389 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01711 K01817 - gmx:100812873 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01711 6 15646658 15648367 Vimu6g01711 6 15646658 15648367 ECH