Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01701 ATGCTTCACTCCTCCACTTCTCTTCTTCCCCAAAATAAGCGTCTCGTCTTCTCCTTCCGCTCCAAACCTTATCATTCTCATTCCTTTTTCCATTCTCTCTCTTTCTCCAAATTTATCTCTCTTCCCTCTTCTCTTTCTACATGTTGTCCAGTCGCTCGAATTTCCACCGAGACCTTGGAGGTCTCGCCGTCACCGCCGGGCGACTTCAACTTCTACCGCGAAATCGCTCGCCTCGCCGCGCTCCGCGACAGGATTGCGGCGTGCGCCACGCTCGTCGAGAAGCTCCGAGTGCTCAACGCCGATTCCAGAGTGAAGCGCTTCTTCAGTTCGGGTCGCGGCCTTGCTAGGGTTTTGGCCTCGCTCCGGCTGAGCTCCGACCAACTATTCCTGCTTAAATGCGTGGTTGCTGCCGGGCAGGAGCATGTGCTGTGTTTGGACGGAACCGAATCGCTAGAGTCCGCCGCGGCCGCTGCTTCTACCGCGAGCGCCGTGAAGAGCGCGCTCTACGCTATTGCGGAGATGATTGAGAATTTGAATTCCTTTGATGGCAATGGTGGTGTAGGTTCGGGGATGGCGTTGGGGGATTACGAGATTATTGAATTGAACAAGTTGTTAGAAACTTTGGCGGAAATTGATCAATTCTATGACTGTATTGGAGGAATTATTGGATATCAGATAACAGTTCTGGAACTTATTGTCCAGAAGTCATTTGAGAGGCAGAGTATGAAGTGGTCACACCAGATGCATGAAGCGAAAGAATGCCAAATTTTAGGAATTAATGCACCTAATGGGCATAACCTTTCTGAAGACACAGAGTATGCTTCTCAAGCAGCTCTATGGGGTATAGAGGGTTTGCCAGACCTAGGTGAAATTTATCCTTTGGGAGGTTCTGCCGACAGGCTTGGTTTGGTTGATCCTAAGTCAGGTGAATGCCTTCCTGCTGCAATGCTACCATATTGTGGAAGGACTTTGTTGGAAGGTCTTATAAGAGATCTTCAGGCTAGAGAATTCTTGTACTTCAAGTTATACAATAAACAATGTATCACACCCGTTGCAATAATGACAAGTGCCGCAAAGAACAACCACAAACACGTCACTTCTCTGTGTGAAAGACTTTCATGGTTTGGGAGAGGTCGATCAACTTTCCAACTTTTTGAGCAGCCTCTTGTTCCAGTTGTTGGTGCAGAAGAAGGTCAGTGGCTGGTCACCAAACCATTGAGTCCCTTGAGCAAGCCTGGTGGTCATGGTGTCATATGGAAACTTGCACATGACAAAGGCATTTTCAAATGGTTTTATTCTCAAGGAAGAAAAGGTGCAACTCTGCGCCAAGTCAGTAACGTTGTGGCAGCTACAGATTTAACCCTCCTAGCCTTAGCAGGGATTGGTTTACGTCATGGAAAGAAACTGGGATTTGCATCTTGTGAGCGGATATCAGGCGCTACAGAAGGAGTTAATGTGCTGATGGAGAAGAAAAGTATTGATGGTAAATGCGAATATGGAATTTCTTGTATTGAATACACTGAGTTTGACAGGTTTGGAATTACTACTGGACCTCTTGCTCCAAAAAGTTTGCAGGCAGAGTTCCCAGCCAATACAAACATCTTATATGTTGATTTACCTTCCGCGGAGCTAATTGGATCAAGTAAGAGTGGAAATAGTTTACCTGGAATGGTGCTAAATACCAAAAAGCCAATAGTTTACACAGATCAGTTTGGTAGATGTCATAGCGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATTGCTGACAATTATTTCAATTCGTACTCTTCTAGATGTTATAATGATGTTGAAGATGAGCTAGATACTTTTATTGTATATAATGAAAGAAGGAGAGTTACCTCCTCTGCGAAGAAAAAAAGAAGGCATGGAGACAAGTCTTTACACCAGACACCTGATGGTGCTCTTTTGGATATCTTACGAAATGCTCACGATCTTCTTTCACAGTGTTGTATAAGACTTCCTGAGATTGAAGCTAATGAGAACTATGTTGATTCGGGACCACCATTTCTCATCCTTTTGCATCCTGCTCTTGGTCCTCTTTGGGAAGTCACTAAGCAAAAGTTTTATGGTGGTTCCGTATCGGAGGGCTCTGAGTTACAAATAGAGGTTGCAGAGTTTTTTTGGAGGAATGTACAGCTCAATGGAAGCCTGATCATAATAGCTGAGAATGTTATGGGCTCAATGAAGATTAATGAGAGCGGTGAACCCATACTACATTATGGCCAAAGGTGTGGAAAATGTAAGTTGCAAAATGTCAAGGTGTTGAACAAGGGAATTGATTGGAACTGTGATCGAAACATATACTGGAAACATGATGTGCAGCGATCTGAGGTGCTGCAAGTCATACTTCATGGAAATGCTGAATTTGAGGCTACTGATGTTGTCTTACAGGGAAATCATGTGTTCGAAGTTCCAGATGGCCACAGACTCAAAATCATGCCGGGAAACCCAGGTTTAGCAATCCAGTTAGATCCAATTGATAAAGATATGATGGAAAGGGGAAGCTGGCACTGGAATTACAGGGTAGAAGGTTCTCACATTCAGCTAGATTTAGTAGAATCATAA 2592 0.4444 MLHSSTSLLPQNKRLVFSFRSKPYHSHSFFHSLSFSKFISLPSSLSTCCPVARISTETLEVSPSPPGDFNFYREIARLAALRDRIAACATLVEKLRVLNADSRVKRFFSSGRGLARVLASLRLSSDQLFLLKCVVAAGQEHVLCLDGTESLESAAAAASTASAVKSALYAIAEMIENLNSFDGNGGVGSGMALGDYEIIELNKLLETLAEIDQFYDCIGGIIGYQITVLELIVQKSFERQSMKWSHQMHEAKECQILGINAPNGHNLSEDTEYASQAALWGIEGLPDLGEIYPLGGSADRLGLVDPKSGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYNKQCITPVAIMTSAAKNNHKHVTSLCERLSWFGRGRSTFQLFEQPLVPVVGAEEGQWLVTKPLSPLSKPGGHGVIWKLAHDKGIFKWFYSQGRKGATLRQVSNVVAATDLTLLALAGIGLRHGKKLGFASCERISGATEGVNVLMEKKSIDGKCEYGISCIEYTEFDRFGITTGPLAPKSLQAEFPANTNILYVDLPSAELIGSSKSGNSLPGMVLNTKKPIVYTDQFGRCHSVSGGRLECTMQNIADNYFNSYSSRCYNDVEDELDTFIVYNERRRVTSSAKKKRRHGDKSLHQTPDGALLDILRNAHDLLSQCCIRLPEIEANENYVDSGPPFLILLHPALGPLWEVTKQKFYGGSVSEGSELQIEVAEFFWRNVQLNGSLIIIAENVMGSMKINESGEPILHYGQRCGKCKLQNVKVLNKGIDWNCDRNIYWKHDVQRSEVLQVILHGNAEFEATDVVLQGNHVFEVPDGHRLKIMPGNPGLAIQLDPIDKDMMERGSWHWNYRVEGSHIQLDLVES 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01701 863 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 192 650 IPR029044 -
Vimu6g01701 863 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 65 789 IPR039741 -
Vimu6g01701 863 SUPERFAMILY Nucleotide-diphospho-sugar transferases 128 733 IPR029044 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01701 K22920 - gmx:100788781 1482.62