Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01699 ATGGAAAACGTGGACGAACTCTTATCTTCCTTAATCTCAGACATCCATTCATACACCGACAAAGACCCTCTTCTCCCATGGCTTCGGTATTCCTCAATTCCCATTCTCTTTCTCTGTTTTCCACTTCACTTTCCTGTTTACTCATTCATTCCCAACGTTATTCGCAGCGCGATCCGAAAGATAAAGGACACTCTTCCTCCAAAAATCCTAAAGGAAAAACTACCGGCGTTCTTGCAGAAATGCGCTCACACCTTCGAGCTCGATCGACGTTACAGAAACGACATGCGCTATATTCGAGTGTGGCTCCATCTGATGGATTTTGTGAGTGATCCAAAAACACTTTTGAGTACCATGGAGGTTAATCGCATTGGGACAAAACGTAGTGAATTCTACCTAGCGTATGCTCTTTACTACGAAAAGTGCAAGAAGTACGATGAAGCAGAGAGAATGTACCACGTGGGAGTGAAGAACCTTGCAGAGCCTCTAGATAAATTGCAGAAATCATATGAACAATTTCTTCAACGCATGGAGCAGCGAAAAAATAATAAGAGAACCCAGGATCTCCTGCAGCACCAGGAAGCAAAAGCTTCCAGGAAGCCTCTGTCTTTAAAGAGTTCTGATGACAAGAAGACAGAGGGAAGAAAAAGCAACGGAGCATGTTGCCTTGAGGGTGTGCAGAAGGGGCCCGAAATTCAGAGTTATGCAGCTAAAGCTGTAGCCAGTGATAAAAACTTAAAGTCTAAGAAGGATGAGATCAAAAAATTTCGTGGTGATGATACAGTTGTAGTAAAATTTGTTGACACTGCCATGGTTGGAAAGTCTGAAGCTGAAGATGCATGCCATCATGGATTGGTGGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATCAACAGCATGTTCCGGGAGCCATTGGAGATTGTTCCATTGGGCAGGAAATCTCATAAAAACCATTCAAAAGAAAATCGTAGTACAAAGAATGAGTTTGAGGTTTTTGTTGATGAAAACTTGGATCATGAAATCAAACCACCCGGTTCTTTATCACTTCAGAAAAGGACCGTAGCCAGCCAACCTCACCAAGAGCCGCTCCAGATATACATTGATGGTGAAGAACATTCTGAGAACAGTAATACGAATTTGTCTGAAGGTGGTTCTGCTTCATCGACATCGCAATCAAATGGCTTTGTTTTTCTCCGCCCCAGGGATATTACTTCCGAAAAATCTAGTAACATGGATGCTGACAGCTGTCGTAATTCAAAGTTCAGAGAGGATACAGTCGTTTGCAAATTTGTTGGTTCCACCATTTTGGATGAACCAGAGGTGGAAAATGTTTGCCACCATGGTTTAGTAGACCCCACCATCAACTTGAAGGAAGCTATGGATGATATAAATAACATGTTTGGGAAACCAATAGATTTTGTTAGGAAAAGAAGAACCACCAAACAGGAGAAAGCACCCCAGAGCAATAGGGGAAATGACTTTGGTGGGTTTTCAATCCTTGCTGACGACGACCATCTGGAACAGCAAGTTCCACCACCACCAAAATTGCCTGGAAAGTCCAAGGAATGTGATTTGTTTGAGCCAACTCTCCTCACAAAGGAAGCCATGGACGATATAAACAAAATGTTTAACATGCCCCTGAATTTTTAG 1653 0.4253 MENVDELLSSLISDIHSYTDKDPLLPWLRYSSIPILFLCFPLHFPVYSFIPNVIRSAIRKIKDTLPPKILKEKLPAFLQKCAHTFELDRRYRNDMRYIRVWLHLMDFVSDPKTLLSTMEVNRIGTKRSEFYLAYALYYEKCKKYDEAERMYHVGVKNLAEPLDKLQKSYEQFLQRMEQRKNNKRTQDLLQHQEAKASRKPLSLKSSDDKKTEGRKSNGACCLEGVQKGPEIQSYAAKAVASDKNLKSKKDEIKKFRGDDTVVVKFVDTAMVGKSEAEDACHHGLVDPTINMKEAMNAINSMFREPLEIVPLGRKSHKNHSKENRSTKNEFEVFVDENLDHEIKPPGSLSLQKRTVASQPHQEPLQIYIDGEEHSENSNTNLSEGGSASSTSQSNGFVFLRPRDITSEKSSNMDADSCRNSKFREDTVVCKFVGSTILDEPEVENVCHHGLVDPTINLKEAMDDINNMFGKPIDFVRKRRTTKQEKAPQSNRGNDFGGFSILADDDHLEQQVPPPPKLPGKSKECDLFEPTLLTKEAMDDINKMFNMPLNF 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01699 550 MobiDBLite consensus disorder prediction 180 216 - -
Vimu6g01699 550 Coils Coil 162 182 - -
Vimu6g01699 550 MobiDBLite consensus disorder prediction 479 499 - -
Vimu6g01699 550 MobiDBLite consensus disorder prediction 180 217 - -
Vimu6g01699 550 Pfam Mad3/BUB1 homology region 1 57 155 IPR013212 -
Vimu6g01699 550 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 7 550 IPR015661 GO:0007094
Vimu6g01699 550 SMART mad3_bub1_i 4 155 IPR013212 -
Vimu6g01699 550 MobiDBLite consensus disorder prediction 374 395 - -
Vimu6g01699 550 Gene3D - 52 192 - -
Vimu6g01699 550 ProSiteProfiles BUB1 N-terminal domain profile. 11 193 IPR013212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01699 Vimu-Chr6 15553791 15556160 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01699 - - gmx:100806627 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01699 6 15553791 15556160 Vimu6g01699 6 15553791 15556160 ECH