Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01676 ATGTCATCATCGTCTTCCCAAAGCCTCAGAATTGGCATAGTTGGATTCGGCACCTTTGGCCAATTTCTGGCCAAGACAATGATAAAACAAGGCCACTCTCTCTCTGCAACTTCTCGATCCGATTACTCCGACCTCTGTCTCCAAATGGGCATTCACTTTTACAGGGATGTCAGCGCGTTCCTTGCTGCTGACATAGATGTCATAGTGTTGTGCACATCGATATTATCGCTATCCGAGGTTGTGGGGTCAATGCCACTCGCTTCCCTGAACCGCCCATCACTCTTTGTTGATGTTCTTTCAGTCAAAGAGCACCCAAGAGAACTTCTGCTACGAGAGTTGCCAGTGCACTCCGACATTCTCTGCACTCACCCTATGTTTGGACCTGTCAGTGGCAAGAATGGATGGAAAGGTCTCACTTTCATGTATGACAAAGTTCGGATAAGAAATGAAGCTATCTGCTCTGGTTTCATCCAAATTTTTGCCAGTGAGGGTTGCAAGATGGTACAAATGACTTGTGAGGAACATGACAAAGCAGCTGCGAAGAGCCAATTTATCACACACACAATTGGCAGAACATTGGCAGAAATGGATATTAAATCCACACCTATTGACACCAAGGGCTTTCAGGAACTTGTTAAATTGAAGGAGACGATGATAGGAAATAGTTTTGATTTGTTCAGTGGATTGTACGTGTATAACAGATTCGCCAGACAGGAGCTGGAAAATCTTGAACATGCCTTGCAAAAGGTCAAAGAAACGCTGGTTGAAAGGATGAACGAGGAGAAGGGTCAAGAAAAGAACTGA 804 0.4465 MSSSSSQSLRIGIVGFGTFGQFLAKTMIKQGHSLSATSRSDYSDLCLQMGIHFYRDVSAFLAADIDVIVLCTSILSLSEVVGSMPLASLNRPSLFVDVLSVKEHPRELLLRELPVHSDILCTHPMFGPVSGKNGWKGLTFMYDKVRIRNEAICSGFIQIFASEGCKMVQMTCEEHDKAAAKSQFITHTIGRTLAEMDIKSTPIDTKGFQELVKLKETMIGNSFDLFSGLYVYNRFARQELENLEHALQKVKETLVERMNEEKGQEKN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01676 267 Gene3D - 1 176 - -
Vimu6g01676 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 170 IPR036291 -
Vimu6g01676 267 Coils Coil 233 260 - -
Vimu6g01676 267 PANTHER AROGENATE DEHYDROGENASE-RELATED 4 262 IPR045011 GO:0006571|GO:0033730
Vimu6g01676 267 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 9 267 IPR003099 GO:0004665|GO:0006571|GO:0008977
Vimu6g01676 267 Pfam Prephenate dehydrogenase, nucleotide-binding domain 33 132 IPR046826 GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01676 Vimu-Chr6 15391312 15393172 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01676 K15227 - gmx:100787362 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01676 6 15391312 15393172 Vimu6g01676 6 15391312 15393172 ECH