Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01674 ATGGGAAAATATCTTGAATCTGCGGCGAGGCTGGAGGAGTTATCGCGGATTGTGTCATCTGCGAAGCCCAATATCAGGCCGAAGGGGACGCTACCCAGAACGCCCAGCCGTGTGGTCACGACTCGAAGTGCGACCCCAATTGGTGTTAAGGTCGAGCTTGCCAAAAAGATGGAACCTTTCGAAGAATGTCGGACACCCCTCGCGAAGGTTGTTGCCGATTGCGCTAAGCGGTGGTTTCAGGACACCCTCAAGGAGGCCAAGGCTGGGGACACTGGCATGCAGGTTTTGGTGGGTCAAATGTATAACTCTGGCTATGGTGTTCCAAGGGATCCCCAAAAGGTTACTGACTACACTGTAATGAGCTTTGTTTACAGGGACATGTTTGGATTAGTAAAGCGTCAAGAAATCGAAATTCAGTTTGGAAAGTGTGTGGTAAACGGCCAGGTTACAGAGCAAGTGATTCAGATTCATGTGATCAGGAGAACAAAGATAAATCCTGTCCTTAATTTTCGAGTTGTGGAGGTGAAAGTTGGTTTGCACTGTGACGATTGTATCAGGAAAATCCTCAAAGCCATAAAGAAGATAGAAGACATTGAAACGTATAACGTGGACACAAAACTGAACAAGGTGATCGTTACTGGCAACGTCACAACAGAAAAAGTCATCAGAGTCCTTCAAAAGATTGGCAAGAATGCAATTGCCTGGAAAGATGATCAAAGCGATAACTCAGTAGTTTAG 738 0.4621 MGKYLESAARLEELSRIVSSAKPNIRPKGTLPRTPSRVVTTRSATPIGVKVELAKKMEPFEECRTPLAKVVADCAKRWFQDTLKEAKAGDTGMQVLVGQMYNSGYGVPRDPQKVTDYTVMSFVYRDMFGLVKRQEIEIQFGKCVVNGQVTEQVIQIHVIRRTKINPVLNFRVVEVKVGLHCDDCIRKILKAIKKIEDIETYNVDTKLNKVIVTGNVTTEKVIRVLQKIGKNAIAWKDDQSDNSVV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01674 245 SUPERFAMILY HMA, heavy metal-associated domain 170 235 IPR036163 GO:0046872
Vimu6g01674 245 ProSiteProfiles Heavy-metal-associated domain profile. 170 233 IPR006121 GO:0046872
Vimu6g01674 245 Gene3D - 170 234 - -
Vimu6g01674 245 Pfam Heavy-metal-associated domain 175 230 IPR006121 GO:0046872
Vimu6g01674 245 PANTHER EXPRESSED PROTEIN 1 117 - -
Vimu6g01674 245 CDD HMA 178 232 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01674 Vimu-Chr6 15377359 15380897 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01674 - - gmx:100811436 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01674 6 15377359 15380897 Vimu6g01674 6 15377359 15380897 ECH