Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01652 ATGGAAGATGATCGAACTCCAAAACCAGTAGTTATCATCACAGGATGTTCCACGGGAGGGATAGGCCACGCGCTTGCGTGCGCGTTCGCGGAGAAGAAGTGCAGGGTGGTGGCGACGAGTAGGTCGCGGTCGAGCATGGCGGAGCTGGAACACGACCACAGATTTTTGTTGGAAGAGTTGGATGTTCAGTCCGATGAGAGCGTGCGCAGAGTTGTTGACGCAGTTGTCGAAACTTACGGTCGCATCGACGTGCTCGTTAACAACGCAGGTATTCAGTGCGTGGGTCCACTTGCCGAGGTTCCTCTCTCTTCCATCCAAAACACTTTCGACACCAATGTATTCGGTAAGTACGGTCACCATACCCTTTTCATCTAA 375 0.5253 MEDDRTPKPVVIITGCSTGGIGHALACAFAEKKCRVVATSRSRSSMAELEHDHRFLLEELDVQSDESVRRVVDAVVETYGRIDVLVNNAGIQCVGPLAEVPLSSIQNTFDTNVFGKYGHHTLFI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01652 124 Pfam short chain dehydrogenase 10 115 IPR002347 -
Vimu6g01652 124 Gene3D - 8 123 - -
Vimu6g01652 124 PRINTS Glucose/ribitol dehydrogenase family signature 11 28 IPR002347 -
Vimu6g01652 124 PRINTS Glucose/ribitol dehydrogenase family signature 80 91 IPR002347 -
Vimu6g01652 124 PANTHER NADPH-DEPENDENT 1-ACYLDIHYDROXYACETONE PHOSPHATE REDUCTASE 8 116 - -
Vimu6g01652 124 Coils Coil 46 66 - -
Vimu6g01652 124 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 117 IPR036291 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01652 10 117 Acyl Lipid Metabolism Gene Families AT1G63380 32.203 8.19e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01652 - - gmx:100789660 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01652 6 15220705 15221079 Vimu6g01652 6 15220705 15221079 ECH