Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01638 ATGGGAGTTGGAGATTACTTGTCTGATCTAATGGGCACTGGTAGTGGAAGCCGCCAACACAGCAACAATAGCAGAAAGCAATTGCAGACCGTAGAGCTGAGGGTGACGATGGATTGTGATGGCTGTGTGCTCAAGGTTAAAAAAACTCTCTCTTCGTTAGATGGAGTAGAATCAGTGGAGATAAACAGGAAACAGCAGAAAGTGACGGTAACTGGTTACGTGGAAGCAAACAAGGTGCTAAAGAAGGCTAAGTCAACGGGGAAGAAGGCTGAGATATGGCCTTACGTGCCATACAGCATGGTGGCAAATCCTTATACTGTTCAAGCTTATGACAAGAAGGCTCCTCCGGGTTACGTGAGGAGAGTGGACAACTCTGCCACCATTGAAACAGTGACAACTTATGGTGATCCATACACCACCATGTTCAGTGATGAAAACCCGAATGCATGTTCCATCATGTAG 462 0.4632 MGVGDYLSDLMGTGSGSRQHSNNSRKQLQTVELRVTMDCDGCVLKVKKTLSSLDGVESVEINRKQQKVTVTGYVEANKVLKKAKSTGKKAEIWPYVPYSMVANPYTVQAYDKKAPPGYVRRVDNSATIETVTTYGDPYTTMFSDENPNACSIM 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01638 153 Gene3D - 16 94 - -
Vimu6g01638 153 ProSiteProfiles Heavy-metal-associated domain profile. 28 91 IPR006121 GO:0046872
Vimu6g01638 153 Pfam Heavy-metal-associated domain 33 89 IPR006121 GO:0046872
Vimu6g01638 153 SUPERFAMILY HMA, heavy metal-associated domain 26 95 IPR036163 GO:0046872
Vimu6g01638 153 CDD HMA 32 91 IPR006121 GO:0046872
Vimu6g01638 153 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 30 151 IPR045181 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01638 Vimu-Chr6 15117229 15117782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01638 - - gmx:100780586 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01638 6 15117229 15117782 Vimu6g01638 6 15117229 15117782 ECH
Vimu11g04063 11 62380940 62381485 Vimu6g01638 6 15117229 15117782 PCT