Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01633 ATGGGAAGACATAATGAATCTGCGCCTGAAAATGTTTCTGAGGCCAAAGGGTCATCTTATGAATTATATGGGCAACGTTTGACGGGCATGGGCGTACCACTTTCCCCGACAACCTCAAATAACCCTCGTAACAGTCACAACCACACAACAAACACTGTCATAAACACTTCTCACTTTCTTCGGACTTGTGGCCTCTGCAAGTGTCGCTTGGCACCTGATCGACGAGACATCTATATGTACAGGGGGGATACTGCATTTTGCAGTTTGGAGTGTAGGGAGAAGCAGATGAAGCAAGATCAGAGAAAAGAAAAGTGGAAGGCAGGGTCTAACAAGGAGCACCACCGTGCATCACCACCTGGCAAGGCTTCCACCAAAAGTGAAACGGCTGCGTGTAATTGA 399 0.4762 MGRHNESAPENVSEAKGSSYELYGQRLTGMGVPLSPTTSNNPRNSHNHTTNTVINTSHFLRTCGLCKCRLAPDRRDIYMYRGDTAFCSLECREKQMKQDQRKEKWKAGSNKEHHRASPPGKASTKSETAACN 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01633 132 MobiDBLite consensus disorder prediction 98 132 - -
Vimu6g01633 132 MobiDBLite consensus disorder prediction 29 50 - -
Vimu6g01633 132 ProSiteProfiles Zinc finger FLZ-type profile. 58 103 IPR007650 -
Vimu6g01633 132 MobiDBLite consensus disorder prediction 31 50 - -
Vimu6g01633 132 MobiDBLite consensus disorder prediction 98 120 - -
Vimu6g01633 132 Pfam zinc-finger of the FCS-type, C2-C2 54 102 IPR007650 -
Vimu6g01633 132 PANTHER FCS-LIKE ZINC FINGER 5 30 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01633 Vimu-Chr6 15070968 15071575 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01633 - - pvu:PHAVU_001G250900g 214.542