Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01626 ATGGATTCGCCCAACAGTGGCAGTATGCAATCCTCCAGCACCGCCGCTGATGAAGACTACGATTCACGCGCCGACCCTTCCTCCTCCTCATCAATCTCTGCCTTCCTCAACAACAACCCCGTTCCTCCGCCGCAACCAACAACGTTAACCGCCCATGTTCCTCCCTTCCAAGCCCACGTCTTCGACCCTTTATCCAATTACTTGGATCCAACACAAAGATCGCACTCACACCCCGACACAAGCCAAATCCTTAACCTCGACATGATGTGGAACACCGTTGCCAGATCCGAACCCGATCTCGCTGGCTTGATGCCTGGCTCTTCTTCACCCTCCCCGCACAACAACAGCAGCAGCCAAGGTTTTCTGTTATCTCAACTGGGAGCAGGTCAAAGTCAACCACGCGGAGGAGGAGCCACTAACGTTGCTGTTTCTGCTTTTCCCACCACTCTCGCTTCGGAAAGTGCTTCTGCACGGGGAGGATTTGAACAAAACAGTACTAACACCAACACCAACACCAACGTGGTTCGAAACCCGAAGAAGAGGTCGAGAGCTTCTAGGCGTGCACCAACTACTGTGCTCACTACGGACACCACAAATTTCCGAGCCATGGTTCAGGAATTTACTGGCATCCCAGCTCCTCCTTTCACTTCCTCACCCTTCCCGAGAACCCGGTTGGATCTCTTTGCTTCTTCTAATGCATCTTCCTCCGCGTTACTAAGATCCGCTTCCTCTCATTTAGAACAACCTCCTTCACAGCCGCAAACACAAACCGCGTCTTATCTTCTTCGCCCCTTTGCACACAAAGTCCAAGCTCAACCCTCTTCAATCTCACACAGCAATACTTTTTCTCCCATGTTGAACACCTTGGCTTCTAACAACAATTCGGGTTCCGGCTCCACCTCCATTCACTACCAGCACCACTCTCTAAACATGCAAAACCCAATTCTCAGCCTCCAATCCATTCTCGGGAACAACGACTCTTCTGTTCTTCTCGGTTCTAAATCACAACGACAACGACAACAACCCTCCTTGGAAATCACGCCCGCTGCTGTTGACTCGCACCTCAAGATGGGTGGTTTGGAAGAACTGGGATTGAGCCATGCGCACGTCGGTGGTCATCATCACCATCATCATCAAAACATGAACTTGGTTACTTCTTCATCAGACGGAGCATTGTCGAGGGTCAACAACAACATAACCATAAACAACAACATGCGTGGTCCTTCCTCGGCAGACTGGGCCCAGGCCCAAAGAATTGGCGGCAACAATGATGAAGGGGTTTTGAGGTCTCTGAGTGGAGGCACTGGCACTGGCACCTTAAACTACAGAAGCAGTGTTTCGGATTTTCATGGAGAGAAGGGAGCACCGGAATGTGCTGTGGCTGCAAGAAGCGAAGGTATGGTTGAATCGTGGATTAATTGTTCTTCTGATTAG 1434 0.507 MDSPNSGSMQSSSTAADEDYDSRADPSSSSSISAFLNNNPVPPPQPTTLTAHVPPFQAHVFDPLSNYLDPTQRSHSHPDTSQILNLDMMWNTVARSEPDLAGLMPGSSSPSPHNNSSSQGFLLSQLGAGQSQPRGGGATNVAVSAFPTTLASESASARGGFEQNSTNTNTNTNVVRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFTSSPFPRTRLDLFASSNASSSALLRSASSHLEQPPSQPQTQTASYLLRPFAHKVQAQPSSISHSNTFSPMLNTLASNNNSGSGSTSIHYQHHSLNMQNPILSLQSILGNNDSSVLLGSKSQRQRQQPSLEITPAAVDSHLKMGGLEELGLSHAHVGGHHHHHHQNMNLVTSSSDGALSRVNNNITINNNMRGPSSADWAQAQRIGGNNDEGVLRSLSGGTGTGTLNYRSSVSDFHGEKGAPECAVAARSEGMVESWINCSSD 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01626 477 MobiDBLite consensus disorder prediction 154 190 - -
Vimu6g01626 477 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 380 IPR039609 -
Vimu6g01626 477 MobiDBLite consensus disorder prediction 1 17 - -
Vimu6g01626 477 MobiDBLite consensus disorder prediction 107 121 - -
Vimu6g01626 477 Pfam VQ motif 187 214 IPR008889 -
Vimu6g01626 477 MobiDBLite consensus disorder prediction 99 121 - -
Vimu6g01626 477 MobiDBLite consensus disorder prediction 154 178 - -
Vimu6g01626 477 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01626 Vimu-Chr6 15004051 15005484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01626 - - vun:114182982 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01626 6 15004051 15005484 Vimu6g01626 6 15004051 15005484 ECH