Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01581 ATGGCGGAGCTCCGCCACTCCTCTTCCCTCGGCAGCCGAGCCTCCAATTCTCCGATGAAGCGTGATGCCGTCGCCGTCGCTGTCGGCGGCGGCGGCGATTCCTCTCCACTCATTCCCGACAGCCACCTCACCGACGACGACGAGCACGATCGCCACTCGTCCAAGGAGCGCGACCGGCATGTCTGCTCCTTCTTGAACGACGACCCTAGGGTTTCGCCTCACAACTCCAGGATCTCTCTACGGACTGCTGGGAATGGTTCCCATCTGTGGCAATTAGCTCTACAGAAGCGTAAGGAAGGACGATGTCCTCTAGAGCCTGGAGAAGTGGCCGTTATTCTTCGGGCTATGGGCTATCCTAAGGAAACTCAAATTTACGTTGCTTCTGGTCAGGTTTATGGTGGACAGAACCGGATGGCTCCACTAAGAAATATGTTCCCTAATCTGGTTACTAAGGAGGAGCTAGCAACCAAAGAGGAGTTAGATGGTTTCAGAAAGCATGTGACAAGCCTAGCAGCTCTTGACTTCTTAGTGTGCTTGAAGTCAGATGTATTCGTGATGACCCATGGAGGCAACTTTGCTAAGCTGATTATCGGCGCCCGTAGATACATGGGTCACCGTCTAAAGTCCATTAAGCCTGACAAAGGGCTAATGTCAAAGTCTTTTGGGGATCCGTACATGGGTTGGGCTACTTTTGTAGAAGATGTTGTTGTTACTCACCAGACGCGAACGGGATTGCCGGAAGAGACTTTCCCTAACTATGACCTCTGGGAGAACCCTCTGACTCCATGCATGTGTAGAGCCTGA 804 0.5249 MAELRHSSSLGSRASNSPMKRDAVAVAVGGGGDSSPLIPDSHLTDDDEHDRHSSKERDRHVCSFLNDDPRVSPHNSRISLRTAGNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCRA 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01581 267 Gene3D - 44 210 - -
Vimu6g01581 267 MobiDBLite consensus disorder prediction 1 68 - -
Vimu6g01581 267 MobiDBLite consensus disorder prediction 40 65 - -
Vimu6g01581 267 Pfam GDP-fucose protein O-fucosyltransferase 93 203 IPR019378 -
Vimu6g01581 267 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 83 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01581 Vimu-Chr6 14673672 14678478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01581 96 266 Miscellaneous Gene Families AT1G22460 38.342 7.89e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01581 - - vra:106753406 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01581 6 14673672 14678478 Vimu6g01581 6 14673672 14678478 ECH