Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01577 ATGTTGTTCAGTCGTCGGAGTAGCTTCCAAACCTCTAACGGTGTCGCCTCTGAACACAGCCGTTATCGTTTCAAGTACCGGACAAACAATGTAGAATCTCTTTTCTTTTCAGTAATCTTGGAATTTCAAATTCGGCGGGGTGCTGTGAAATTGAATATTCGTAATTGTTCGCAGAGAGTGGATGGCGTTGCCGCCGAGCCGGAACCTGATTGGAGCTTTGACGATCTTGTTTCGGAACTCAACGATTTGGAGACGAAGCTCGCTAATGCTACTTCTTCCACCGAACGCTCTATACCTTTCGAAAAATCAAGAACTCGTGGGAGAGAAATCGAGAAAGGGAGAGCTTTCATACTGCGAGCCGATGAGTATGAGATGGAGGACTCGGAGAGCGAGGATGATGATCATGTAGACAAGGCATTGGTAGTAGCTGGCAGTGCCAAACGTGACAGTGATGACGATTCGGACATTGTTTCTGGTTTTGAAGTGCGACCTTGCTTGATGGATGAATTGGGAGAGGTAGAAGGTGCCTTGTTTGAGTTGGCGCAGGAGCACCAGCTTAGGGTTAAGGATGAAATTAGGAATAAGATTTCGGCATTGGAGACAGCTTTGGTGAATGAAACTCAGAATTCTGCTTCTTCTCTCCTTCGAGTTGAGAAATATAAAGAAACAAGGCAGGAATTGGATAAAAAGTTTGACACTCAATATCAGCGTAGGATTGCAGAAGCACTTGATAATCACTTGACAGCTGTTCAACGGGACCGTGAACTCAAATCACAAATAGAAGAAAGGAAAATAAGAAGTGATGCAGCTTACGAAGAGGCCAAGAGAAAGGCTGCTTTTGAAAAGCTGCAGCAAGAAAAGGCTAGAGCTGAAGCAGAGCTGAAAACGCCTGATGAGGCCAAAGTTAGAGCTGCTGAGGAAGCAAAACGAGAAGCTGAGAGAAAAGCAGCAATGGAAGCTAGAAAACAGGCAGCAATTGAAGCTGAAAAAAAAGCAGTAAAGGAAGCCAGTGAAACTTCCAAAAAGGTTACTTCTGGAGGGACCCAACAAGCTGCTGGGGATTCAACAGATACATCAAACCTATCCAATGCTGAAAACAAGGAATATGGTAATTTATATCGAGCTGCACCAAGTGCTTTGAATCTAGAACAGGGGAGACTGCAGAAATTCAAAGAGCTATGTGAGAGAAACCAAATGATAAGATCAAGTTCTAATAAGGATTACACTCGGCATGAGGGTAATATTTCCCGGAATATAAGGCAAATAAGGGGTGTAAGAGACAATGTCAGGTCAAAAGCCAGCGAACTGATTAAACTTTTGAATGATCCTCAATGTCCTCAATCAGTCAGCGTTGAGATATTTGCTAAAAAGGTTGTTTCGTACTGTGAAAACCCCGGGAATGCTCCCTTTGCCAGTGCCTATGTCATCGTTCTTGTTACATCTCAGATTCCACACGCAATGGATATTTTGCTTGCTGAGCTTCACATGGCTTGCCTTTATACCGTTCCAAAGCACCTGCTTTACAAGAAGGCCGCCTTTCAATCAAAGGAGGCATACTTCAGAAGTATTGGTTATCGAGAAGTGGATGGAAAGTTGGAGAGTACAGAAGATTATTTAAAGCGGTTAGAATCATACATGAAGGTGTATGGTGCACTGGTTCAGACTGAAACTACGAACGTTCAAAATTTCCACGGCTTGCCAGAAGGTTGGGCGTGGCTTGCAAGGTTTTTGAACACACTCCCAGCAAATCATTACACAGCTGTTTCGCTCAATGCATTCTTGCAAATGGCAGGATTTGCTCTCTTTAAAAGATATAAATCGCAATTCTTAAAGATGCTGAACGTCATCTCTGAGAACTTTTTAGTTGATTTGAAATCACGGAATATACCAGAATTGACGAAGACGATTACGGAGATACAGACTTATATAGAAGATAAGAAGTTCCTTCAAGAGCCAGAAGGAAAGAGCCTGCAGTCTAATTTGTTATCTAATGTGTATGTTAATTATTGA 2010 0.4269 MLFSRRSSFQTSNGVASEHSRYRFKYRTNNVESLFFSVILEFQIRRGAVKLNIRNCSQRVDGVAAEPEPDWSFDDLVSELNDLETKLANATSSTERSIPFEKSRTRGREIEKGRAFILRADEYEMEDSESEDDDHVDKALVVAGSAKRDSDDDSDIVSGFEVRPCLMDELGEVEGALFELAQEHQLRVKDEIRNKISALETALVNETQNSASSLLRVEKYKETRQELDKKFDTQYQRRIAEALDNHLTAVQRDRELKSQIEERKIRSDAAYEEAKRKAAFEKLQQEKARAEAELKTPDEAKVRAAEEAKREAERKAAMEARKQAAIEAEKKAVKEASETSKKVTSGGTQQAAGDSTDTSNLSNAENKEYGNLYRAAPSALNLEQGRLQKFKELCERNQMIRSSSNKDYTRHEGNISRNIRQIRGVRDNVRSKASELIKLLNDPQCPQSVSVEIFAKKVVSYCENPGNAPFASAYVIVLVTSQIPHAMDILLAELHMACLYTVPKHLLYKKAAFQSKEAYFRSIGYREVDGKLESTEDYLKRLESYMKVYGALVQTETTNVQNFHGLPEGWAWLARFLNTLPANHYTAVSLNAFLQMAGFALFKRYKSQFLKMLNVISENFLVDLKSRNIPELTKTITEIQTYIEDKKFLQEPEGKSLQSNLLSNVYVNY 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01577 669 Coils Coil 73 93 - -
Vimu6g01577 669 Coils Coil 301 329 - -
Vimu6g01577 669 Gene3D - 380 651 IPR038506 -
Vimu6g01577 669 PANTHER GLE-1-RELATED 66 659 IPR012476 GO:0005643|GO:0016973
Vimu6g01577 669 MobiDBLite consensus disorder prediction 331 363 - -
Vimu6g01577 669 Coils Coil 271 293 - -
Vimu6g01577 669 Pfam GLE1-like protein 394 616 IPR012476 GO:0005643|GO:0016973
Vimu6g01577 669 Coils Coil 189 209 - -
Vimu6g01577 669 MobiDBLite consensus disorder prediction 339 363 - -
Vimu6g01577 669 FunFam Protein GLE1 377 650 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01577 K18723 - gmx:100802744 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01577 6 14646744 14653439 Vimu6g01577 6 14646744 14653439 ECH