Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01572 ATGATTCATTCGAACTCTCTTCAAAATCAGATTGTTACAAGGCTGAAACTGGGAAGTGAGGAGTTTCTGCAGAAGGTACTCAACAACAGAAGATGGACATTGCCAACTCCTGAAACTAAAATTCACCAACTGCTACACACACAAGGCCCTAATTTTCTGTTGAACACCCACCCACCTTTCGGTGATGCCAACCCTGTGAGTAAAGAAAGGAACTACTTTTACGTCGTTCGGGATGATTTGTTGCACCCACTTGTTAATGGCAACAAAGCAAGAAAACTTGATGGTTTACTTCCTCTCCTTCAACGTTATTCTGTCACTGATGTGGTTACATGTGGAGGTTGTCAGAGTGCTCACACAGCTGCTGTTGCGGTTCTGTGTGCTGAGAGAGGAATTGTGTCACATCTGCTTCTACGAGGAGAGCAACCTGAAATTTTGACTGGCTATAACTTGATGTCTTCTATGTATGGGAATGTTACATATGTTCCAAGAACTATTTATGCGAATAGGGAAGAGATGCTAAAGAGCTATGCTGAGTCAGTGGCTGGTAACAATGGTTCTGTTCTATGGCTTGGTGATATCATTGAAACTTCTTCGGCAACTGAATTGTCTACTTCTACAAATTTCATGCAAATGGATGTGAGTAGAAGTGAGGGAAACCATCGACGAAATATTTTAGTTGTCAAAGAAGGTGCTGGTGATTCTGTTGCTCTACTAGGTGTTATTCGCTTAGTGGAATACTTATCACAGAATCATTTACTTGGAAAAGAAAGGCCCATGAGATTTGTTGTAGATGCTGGTACTGGCACAACGGCTATTGGTTTAGGACTTGCAGCTCATTGTTTACGGCTCCCATGGGAGGTATACGCTGTCATGCTGGCTGACAAAATTGAAGGATACAGAAAACAGGAGGTGCATTTGATTTCTGAATTTAAGAAGCATTTTAACATTGAGTTTATTGACGAAATTGTAAATAGAGAAGATGCTGGGATTGTGAATTGGGTGGAACGTGGTCGTCCAAGAAAGTTTGGTAATGTTTTGGAGGGGGAAGTGGAAACATGTCAACAAATTGCCCAACAAACTGGAATTTTGGTGGATCCTGTGTATACATTAGCTGCTTGGGAAACAGCAATGCTTCTCTCCAGTAACAATGCTGAAGAACCAGAAGTGGTGTTGCTTCACACTGGAGGCACATTGGGTATGTTTGGACTGGCACAGAGGTACAAAAATTATTTTGGAATGCTGAAAAAGGGGGTGTTGTAA 1260 0.4175 MIHSNSLQNQIVTRLKLGSEEFLQKVLNNRRWTLPTPETKIHQLLHTQGPNFLLNTHPPFGDANPVSKERNYFYVVRDDLLHPLVNGNKARKLDGLLPLLQRYSVTDVVTCGGCQSAHTAAVAVLCAERGIVSHLLLRGEQPEILTGYNLMSSMYGNVTYVPRTIYANREEMLKSYAESVAGNNGSVLWLGDIIETSSATELSTSTNFMQMDVSRSEGNHRRNILVVKEGAGDSVALLGVIRLVEYLSQNHLLGKERPMRFVVDAGTGTTAIGLGLAAHCLRLPWEVYAVMLADKIEGYRKQEVHLISEFKKHFNIEFIDEIVNREDAGIVNWVERGRPRKFGNVLEGEVETCQQIAQQTGILVDPVYTLAAWETAMLLSSNNAEEPEVVLLHTGGTLGMFGLAQRYKNYFGMLKKGVL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01572 419 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED 21 412 IPR027278 -
Vimu6g01572 419 Gene3D - 72 87 IPR036052 -
Vimu6g01572 419 Gene3D - 88 189 IPR036052 -
Vimu6g01572 419 Gene3D - 200 410 IPR036052 -
Vimu6g01572 419 FunFam D-cysteine desulfhydrase 2 mitochondrial 211 410 - -
Vimu6g01572 419 FunFam D-cysteine desulfhydrase 2, mitochondrial 88 189 - -
Vimu6g01572 419 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 72 408 IPR036052 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01572 K05396 - gmx:100801680 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01572 6 14619453 14622303 Vimu6g01572 6 14619453 14622303 ECH