Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01551 ATGCAGTCCCGTGACCTCTCTCCACTTGCAAATTCTGAACTGTTATGGTTAGAAGAACATGCAAAAGGGTCTCAAACTTGTTCATCATCACCTAAAAATGGTGGCAGCAGCACCATTAATGCTCCTTGTAGCAGAAAAATGAGAAATGAACAGGTATACGCTGATGGAATACCATCTATTTCCTCAAATGAAAGGAAAGCAACTATAAAGGAATTTTATGCTGTTATATACCCTTCATTGAGGTTGCTTCAAGGCGAGTTTAACAATGATCGAAGACACAGTTATGCAGAAGTGAACAGAAAGAGGCTTGAAAAGGTTCTCAGTAAAGATTTAGAGGGAGATGAAGAATGTGGCATATGCATGGAAAACAACATGAAGATGGTTCTGCCTAATTGTGGACATTCCTTCTGCATAAGTTGCTTCCATGATTGGTAA 435 0.3931 MQSRDLSPLANSELLWLEEHAKGSQTCSSSPKNGGSSTINAPCSRKMRNEQVYADGIPSISSNERKATIKEFYAVIYPSLRLLQGEFNNDRRHSYAEVNRKRLEKVLSKDLEGDEECGICMENNMKMVLPNCGHSFCISCFHDW 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01551 144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 144 IPR013083 -
Vimu6g01551 144 PANTHER RING FINGER PROTEIN 41, 151 55 144 - -
Vimu6g01551 144 SUPERFAMILY RING/U-box 103 144 - -
Vimu6g01551 144 ProSiteProfiles Zinc finger RING-type profile. 117 144 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01551 Vimu-Chr6 14527311 14529268 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01551 - - vum:124847613 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01551 6 14527311 14529268 Vimu6g01551 6 14527311 14529268 ECH