Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01537 ATGTGGGGGCTTCTTCGAACTAGAACGTGTTTGCGATATTCAGAGGCCCTTCATCTTCATCAACAATGGAAGAAGAAGGTAGGGTTCTGTTCTTTGTCCGCCGTTGACGGCCGTAATTGCCTTCTTGATCTGCCGGAGATCGAGAAGGTTCTGACGGATATCAAAGCTGACGACGTTAAGGTGATACCGGTTCCCAAGCACTGCGATTGGGCTGATTTCATGGTTCTCGCCACTGGCAGGTCCACCTGGCACGTCAAGAACATAGCCCAAGCCCTAATTTACAAGGCACCACACCCTCCTTCCTTCGTCCTTTTTATCGCTATATTTTCATTATTGATTTTCGATTGA 348 0.4799 MWGLLRTRTCLRYSEALHLHQQWKKKVGFCSLSAVDGRNCLLDLPEIEKVLTDIKADDVKVIPVPKHCDWADFMVLATGRSTWHVKNIAQALIYKAPHPPSFVLFIAIFSLLIFD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01537 115 SUPERFAMILY Nucleotidyltransferase 46 96 IPR043519 -
Vimu6g01537 115 Pfam Ribosomal silencing factor during starvation 46 93 - -
Vimu6g01537 115 Gene3D Beta Polymerase, domain 2 43 102 IPR043519 -
Vimu6g01537 115 PANTHER IOJAP SUPERFAMILY ORTHOLOG 36 96 IPR004394 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01537 - - var:108320274 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01537 6 14419364 14419711 Vimu6g01537 6 14419364 14419711 ECH