Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01526 ATGCCACAGCCAGAAAAATCGCTCGGTAACAACCTTCCAATAATTCGCATTCCAGGAGACGGTAGATGTTTGTTTAGGGCTGTGGTTTATGGTGCATGCCTCAGATCAGGTGAACCATCTCCAAGTCTTAGTAGGCAAAGAGAACTTGCAGATGAACTTAGAGCCAAAGTTGTGGACGAATTCATCAAGAGGAGGGCAGACACAGAATGGATGCCAATAACAGTGGTAATGCAGGATAAGAATTCGAGTAACCTTAAAGTTATAGCTGAATATGGTGAGGAATATGGGAAAGACAACCCTATTGGAGTGATTTATGATGGTTATGGTCACTACGATGCATTATTGAAGAGCAGTCTTAGCTAG 363 0.427 MPQPEKSLGNNLPIIRIPGDGRCLFRAVVYGACLRSGEPSPSLSRQRELADELRAKVVDEFIKRRADTEWMPITVVMQDKNSSNLKVIAEYGEEYGKDNPIGVIYDGYGHYDALLKSSLS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01526 120 Gene3D - 2 71 - -
Vimu6g01526 120 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 16 61 - -
Vimu6g01526 120 ProSiteProfiles OTU domain profile. 12 117 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01526 Vimu-Chr6 14362802 14364119 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01526 K18342 - gmx:100792132 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01526 6 14362802 14364119 Vimu6g01526 6 14362802 14364119 ECH