Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01522 ATGTTTGGCTCCGCTCAACCTTCTTCATCTCCCTTTGGCACCCCTTCTTCAACCCCTGCATTCGGAACCCCTTCTTCTACCCCTGCCTTCGGCACCCCGTCTTTTGCTACCCCATCTTCTACTCCGGCATTCGGAACCCCATCTTCGACACCGGCGTTTGGCGCTTCTTCTACCCCTGCCTTCGGTTCCTCCCTTTTGTCAACGCCTTTTTCTTCTCAACCACAACAACAGCTAACTCCACTGTTTCAACAACAACAACAACAACCAACTTCTTCTCCTTTCGGCTTTCAAAGTTCCCTCGCAGCGCCGCAACCCTCGCCTTTCTCAAATGCGCAATTAACCACTCAGATGGCTAATGTGGCACCTGTTCCTTTCTCTCTCGCCGATCGCGATGTTCAAACAATCGTTGATGCTTACAAGGAAGATCCTGGAAACCCCAAGTACGCTTTCAAGCATTTGTTGTTCAGTGTAACAGAACCACAGTTCAGAGTGAAGCCTGCTGGTGTATCAGACATCATGTGGGCGGAGGCAATGGGGAAGCTTGAAGGTATGGACAGTGCAGATAGAGAACGTCTGTGGCCACAGCTTGTCCAGGGTTTTAAGGATCTTTCGCAACGCCTTAAGATACAAGATGAAGTCATTGTTTCTGATGCAGAGAGATTGCGTATAACCCAAAGCAATGTTAAAATGGTACTGCTCTCCCCTTTGCTTGGACTCGTAGCAGTTCTCCAAAGACATTTTCAGGCTGATACTCTTCCATGGATTCAAAGACTAAAACAAAAGGAACAAATTCTCCAGCAACGTCTTTTAAGAGTAATGAGAGTAGTGGAGGCATTGGAAGGAAAAGGCTGCCGCATACCCTTAACGAAAGGGGAAGCTGAACTTGCTGAGAAATTAGCCACAATAACTAGACAGCTTAAAGGATCTGGAGCGGAACTGTCTAGAAGGGTACAAAATCTACTGACTGTATCTCGTGTTAAAGCTAATAGCAATGGATTTGGTGGCTCCGTTTACCTTCCAGGTTCAACCAAAATTCATGATCAAAGTCTTGCTGACCTACAGGAGGTTTTACAACAGCAAATGGAGGCCATTGCAAGACTTGGCGGTGTTCTGAAACGAGATATACGGAATATGGAGATTATGATCACTGATGACACAGGAAGAATTGAAAATGAGAATTTAATCTGA 1188 0.4613 MFGSAQPSSSPFGTPSSTPAFGTPSSTPAFGTPSFATPSSTPAFGTPSSTPAFGASSTPAFGSSLLSTPFSSQPQQQLTPLFQQQQQQPTSSPFGFQSSLAAPQPSPFSNAQLTTQMANVAPVPFSLADRDVQTIVDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAMGKLEGMDSADRERLWPQLVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMVLLSPLLGLVAVLQRHFQADTLPWIQRLKQKEQILQQRLLRVMRVVEALEGKGCRIPLTKGEAELAEKLATITRQLKGSGAELSRRVQNLLTVSRVKANSNGFGGSVYLPGSTKIHDQSLADLQEVLQQQMEAIARLGGVLKRDIRNMEIMITDDTGRIENENLI 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01522 395 MobiDBLite consensus disorder prediction 1 110 - -
Vimu6g01522 395 Pfam Nucleoporin complex subunit 54 165 321 IPR025712 -
Vimu6g01522 395 PANTHER NUCLEOPORIN P54 1 387 IPR024864 GO:0005643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01522 K14308 - gmx:100797030 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01522 6 14340313 14343349 Vimu6g01522 6 14340313 14343349 ECH