Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01513 ATGAAGTGGGCCGTATTAGGCCTTTTTGAAAATTTGGCCCAGGCCCTGGTCCAGTCACGGGCATTTGACGTTCTGCGATCACAGAAGGGAATGGAGTATTCTCAAGATGATTTCGATCGGTTACTGCTATTCGAGCAAACGCGGAAGACCGCTGAAGCAAACTACGCTAAGAATCCTCTTGACGCTGATAATCTGACCAGGTGGGGGGGAGCTTTGATCGAGTTGTCGGCTTTCGAGAAGCCTAAGGATTCTAAGGCGATGATTAATGATGCCCTTTCAAAGCTGGAAGAGGCTTTGCTGATCAATCCAACGAAGCACGACACTCTTTGGTACTTGGGAAATGCACACACGTCATGTGGGTTTCTAACGCCGGATATCAGTGAGGCAAAGGATTATTTTGACAAGGCACATGAGTATTTCCAGAAAGCTTTTGATGAGGATCCTGAAAATGACCTCTATAGAAAGTCCTTGGAAATTGCTGTGAAGGCTCCAGAACTACACATGGAGATCCATAATAACGAGCTTGGTCCGATGAGTAATGCGGGATCCTCTGCTACTTCAAAAGGAAAGGAATCTAAAAGGCAGAAGAACAATGACTTTAAGTATGACATATTTGGATGGATTATTCTTGCGGTGAGTATAGTAGCATGGGTGGGAATGGCCAAATCTAACATTCCACCGTCACCTCCTAGATAA 696 0.4526 MKWAVLGLFENLAQALVQSRAFDVLRSQKGMEYSQDDFDRLLLFEQTRKTAEANYAKNPLDADNLTRWGGALIELSAFEKPKDSKAMINDALSKLEEALLINPTKHDTLWYLGNAHTSCGFLTPDISEAKDYFDKAHEYFQKAFDEDPENDLYRKSLEIAVKAPELHMEIHNNELGPMSNAGSSATSKGKESKRQKNNDFKYDIFGWIILAVSIVAWVGMAKSNIPPSPPR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01513 231 SUPERFAMILY TPR-like 45 158 IPR011990 GO:0005515
Vimu6g01513 231 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED 31 231 IPR010547 GO:0005742|GO:0045040
Vimu6g01513 231 Gene3D Tetratricopeptide repeat domain 29 182 IPR011990 GO:0005515
Vimu6g01513 231 MobiDBLite consensus disorder prediction 173 194 - -
Vimu6g01513 231 Pfam Plant specific mitochondrial import receptor subunit TOM20 38 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01513 Vimu-Chr6 14304285 14308406 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01513 - - gmx:100775949 352.058