Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01502 ATGAAGCGGCAGAGCAGAGTGTTTGTGGTGATGTTTGTGGTGGTGATGGCATCGTGCGGGTGGATGAAGATGGCGGAAGGCGATGATTTTTCGTCCAAGTGCACGTCGGCGATGGATAAGGTTCCTCCGTGTTTGAGTTTCGCGACGGGGAAGAAAGATATTCCGAGCGACGATTGCTGCGCCGCAACTTTAAGCATAAAGCAGAGCAACCCAGAGTGTTTGTGTTACATCATTGAACTAACTCACAAGGGTAGCCCACAGGTCAAACAGTTGGGTATTCAAGAGGACAAGTTGCTTCAACTCCCTTCCGCTTGCCACATGAAGAACGCCAGCATCACCGACTGTCCCAAGCTTCTGGGTCTATCACCAAGTTCCCCTGATGCTGCAATCTTCACGAACTCTTCGAAGGTATCGCCTGCAACATCAAACACACCAAGTACGACCCCACAAAGCCAAGACGCTTCGCATGGAAGTATGGTAATACCTAGTATGTCGATGATGATAAGTTTGACCATTGTTGTGGCTGCAATTTCACCTGTTTTTGTGAGCATTTATACATGA 561 0.4848 MKRQSRVFVVMFVVVMASCGWMKMAEGDDFSSKCTSAMDKVPPCLSFATGKKDIPSDDCCAATLSIKQSNPECLCYIIELTHKGSPQVKQLGIQEDKLLQLPSACHMKNASITDCPKLLGLSPSSPDAAIFTNSSKVSPATSNTPSTTPQSQDASHGSMVIPSMSMMISLTIVVAAISPVFVSIYT 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01502 186 Pfam Probable lipid transfer 14 115 IPR016140 -
Vimu6g01502 186 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 164 IPR043325 -
Vimu6g01502 186 SMART aai_6 34 115 IPR016140 -
Vimu6g01502 186 Gene3D - 31 112 IPR036312 -
Vimu6g01502 186 CDD AAI_LTSS 43 107 - -
Vimu6g01502 186 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 115 IPR036312 -
Vimu6g01502 186 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vimu6g01502 186 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01502 Vimu-Chr6 14214530 14216339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01502 33 181 Acyl Lipid Metabolism Gene Families AT1G27950 45.333 4.93e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01502 - - gmx:100305718 206.068