Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01475 ATGATTTATCCACGCACAGAAAGTACAGCATATCCTCCATCGTTTGACTTTCGTGGTGTGCTCTCTGCACAAACAAATAATCCAACATGGGGTAATTATGTACACGGGCTACTTACCACTGGTTATCAAAAACCTCGTCCGGGAACAGATGCAGGTGACCATCCTCCCATTACCCCAATGAGATCAGCAGCAGAAGATATGCTGGGCAATGATGCTTGGAAGCTGTACCAATATATTTGTCAACACTTCATAGGAAAAAGGTTGAGTTTTCCATTGGTGGAGAGTCCTTTCATTGTACAGGACAGCATGTTGTCACCAAAGGATTTACTTCTATAA 336 0.4286 MIYPRTESTAYPPSFDFRGVLSAQTNNPTWGNYVHGLLTTGYQKPRPGTDAGDHPPITPMRSAAEDMLGNDAWKLYQYICQHFIGKRLSFPLVESPFIVQDSMLSPKDLLL 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01475 111 SUPERFAMILY Prokaryotic type I DNA topoisomerase 3 85 IPR023405 -
Vimu6g01475 111 PANTHER PROKARYOTIC DNA TOPOISOMERASE 3 85 IPR000380 GO:0003677|GO:0003917|GO:0006265
Vimu6g01475 111 Gene3D Topoisomerase I, domain 4 3 85 IPR013826 -
Vimu6g01475 111 Pfam DNA topoisomerase 3 85 IPR013497 GO:0003677|GO:0003916|GO:0006265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01475 K03165 - gmx:100791807 175.252