Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01471 ATGATGGCTGTGACTGTCACCATCCTGGTCACCTTGCTCTCGGTTCTTTCTTCTGCATCGTGTGCTCGATTGGTCGGGGGGAAGACGGAGATCCCTGACGTGAGGACAAACAGGGAAGTGCAAGAGCTCGGGAGGTTCTCGGTGGAGGAGTACAACAACGGTTTGAAGCTGTTGAACGACAGCGATAACGAGAGAGAGAAGTTGACCTTTACAGAAGTGGTGGAGGCGCAGCAACAAGTGGTGTCAGGGTTGAAGTACTATTTGAAGATCTCCGCTACTCATAGAGGGATTCACAAAATGTTCTCCTCAGTGGTGGTGGTAAAGCCATGGCTTCCTTCCAAGAAGCTCCTCCACTTTGCACCTGCATCCACCACCGACACTGACCAGTGA 390 0.5179 MMAVTVTILVTLLSVLSSASCARLVGGKTEIPDVRTNREVQELGRFSVEEYNNGLKLLNDSDNEREKLTFTEVVEAQQQVVSGLKYYLKISATHRGIHKMFSSVVVVKPWLPSKKLLHFAPASTTDTDQ 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01471 129 PANTHER CYSTEINE PROTEINASE INHIBITOR 2 4 124 - -
Vimu6g01471 129 ProSitePatterns Cysteine proteases inhibitors signature. 78 91 IPR018073 -
Vimu6g01471 129 SUPERFAMILY Cystatin/monellin 31 123 IPR046350 -
Vimu6g01471 129 CDD CY 26 119 IPR000010 GO:0004869
Vimu6g01471 129 SMART CY_4 23 122 IPR000010 GO:0004869
Vimu6g01471 129 Pfam Aspartic acid proteinase inhibitor 36 120 IPR000010 GO:0004869
Vimu6g01471 129 Gene3D - 21 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01471 Vimu-Chr6 14053851 14054874 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01471 - K13899 gmx:100775792 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01471 6 14053851 14054874 Vimu6g01471 6 14053851 14054874 ECH