Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01468 ATGTACTGGTGCAGCGATTCACGCGATGTGGACGTTGTTGACGCTGACGGCGAGGGATTTCCAGTTTCATGTTCTCAGGGCCATCGATCTTCGTTGAATCTCCAAACTCACGATGGCGCTTCCATCTGTCTCGTCTGCTTCTCCAACCTCCTCTCCAATCCTCTCTCCCCAACCGTCCATGTCTCCTACGCTCTCTCCCAGATCTCTCGATCCCTCTCACTGCCTCACTTTCTTCAACCGCTTCTCACATTCCATCCTCATTTTCTTGTTTCGCCTCTCGTCGCCGCCCTCTCCTCCTTCCACGACGAGCCGATCGCTGCACAGCTCACACATCTCATCCTCGCACTCTCTGCGTCCGCCGACCCTTCCGTTTCCTGCGAATTCGTCTCTAGGGTTTCCGATCGCATCACTTCCGGTGCTTTCGGTTGGTCTTCCCCTCAGCTGCACTTGCTTCACTGCCTTGGGGCTCTTCTGAATGGTGAGAAGGGAGATGATCTCCATAAACACATAAAAGACATTGGTAACCTCATTTCTGTTCTTGTTACGGGCCTTCAGTTGCCGAGTGAGGAGATTCGAGGGGAGGTCCTCTTTGTTCTTTATAAACTATCTGTTCTTGAGAGTACTTCAGCAGAGGCAGATGGAAGTGATATGTTGATTCCGTTTTGTCCACAGATCTTGTACCTGTTGGTCGATGTGCTCATGAAGACTCAAAATGACGATGTTCGCATGAATTGTATTGCACTTTTGACTATGCTGGCTCGAAGACATTTGCTCAGGGAAGAATGTGCATATGATACTTATAACATCTCTTCCACCGAAAGAGTTGACGCTAAAGAAACTGAAGATGGCACCAAGGGCGCATCTCTGGTAAATCTGTTTGCTGAAGCCATCAAAGGCCCATTACTTTCGTCAGACAGTCAAGTTCAAATCGGCACTATAGATTTACTCTTTCACTATTTGTCTTCAGTCAAAACTTCAGACTATCAGATTCGAGTCTTAGTGGAAGAAAATATTGCAGATTATTTATTTGAAATATTGAGATTGTCAGGTGAGGACCAAGTACTGAACTTGCCTAACAAGTATTCTCTCGCCTCCATGAAAGCAATATTGATTTTGCTGTGTAGAATACTGTGCATACTTTATAGCCTCGTTCATTGCCACAATATAAAACGAAAGCGTTTGCCCTACTTTAGATTCATTTCTGATCGAATGGAATTCAAAGTTGGTTATCTGGTTCTAGTTGAGTACAAGGACCCAGCAGTCAAGATGTGCCTTCAGGTATTGGACCTTTTATCAACTGCTGAGGAAACTTTTAAACCAAGACTCGTTGTTGGAATTTCAACTCTTATCCCAGCATTACATTATGTGGCGGAAATTCCTTTTCACCCTGTCCAGTGTGCCACTCTGAAGCTCATTTATGAATGCATTTCTGAGTGCCCTGGATCTGTATCAATTTCTCAACTAGAGGAACTGATTCTTGTTTTGATAAGAATGCTTCGAAAGCATTCTGGTGGAGAAATGGGAATGATTCCCGAGACCTTTATAACGGTCTGCTCCGTCTTTGTTGCTCTTATAAGATATCCATCTTGTACTGGAGCTCTAGATCTGTCAAAATCAATCGGGGAAGCAACAAGACATGCCATTTTAGCTTGTCTCTCTGTCTCTGAAAGGAATGTCAACCAAATTCTGCAATGCTTGTACCTACTTAAAGAGGCATATGCATACAGTCACGATGGAAACTCCAGTAACTCTAGTAAGCAGGAACTTCAAAGCAGTATTCTTGATACATGCAGTGCCTATTTACTACCTTGGCTTGTAATGGGCATCAAAGAAATGGAAGAGGACATTGCCCTGGGATTGCTGGAAACTTTTCATTCGATACTGCTTCTGCAGTCTAGTATTAATGCCACGGAATATGCAGAGACTTTGATTTCAGTCGGTTGGTTCAGTTTTTCGTATGAGTGCCTGGGTTTGTTTACAGGAGATAGGATGAAAAATAGAATATATTTGTTGCTAAGTTCCCTCATGGATTCTCTACTAGGGAATGATTCTGGACAACCAATTAGAGAGGCTGTTCTACACCTCTCTCACGATCCTATCGATTTACTCTTTTTGCTTGGGCAAAGGAGTTCTAACAGTTTGGATTTGCCTTCTTGTCAATCTGCTGTTTTGCTGATTTTGTACACCAGTTCGCTATATGATGAAAGACTTGCAGATGAGAAGTTGATTTTAGCTTCTCTTGAACAATATATTCTTCTCAATAGGAGTGATTTTCATCATCGGACCACCGATAATATGACCGTGACACGACTGGTGAATCTTTACAGTTTGTTAAGGGGTCTTGACAATACGAACTACCCAATTCACTACAGTCGAGAAGCGGAGGAGATAATATTCCAGCTCATAAACAATGATGAATGGGACTTACTTTCAGCAAGAATTCACTCAATATCATTGAAGTGGTTGTTTCAGCAAGATGACGTAATCAACTCATTATGCCATCAGACTTTGAAATTTTGCAGAAGCTATAACTTAGAAGAGACTGACATAATTATTGGAAACAATAATCAAACTGTAAATGTACAGACACTAGCTGAGTTAGTATCAACTGAAGATAACTACGGAGCTAGAATTTTCGTGTGCCTATTAGCACAGCTCTTGCAGGCAGAAAGCCATGAGCGTGACGCATTATGTGTTCTTAATGTCGTGGCAACTATGGTTCATGCCTACCCAACTGCTTGTGAGCAATTATCTTTGCATGGAATAGCGACAACAATCAGGAGTTGGTTTTATTTGAGTAATTCTTTGTCGACAACAACGTACATGTCCATCTTGATTTTGGTTTTTAACACTTTGAGTTCAGTGCATCCTGAAACACTCTCTGCTGATCAAAGTTGGGTTGCGGTAACAATGAAGATGATGGAGTATTCAATTCCACCCGAAAAGGTTGATATATTAAGTGACGAAAGTCTCTTCGTTATTGGCATTCTTTCCTTAATATTGCATCTTTCCACCAAGAAAACACTTGAAGAGACTTCAAAGACCATTCTTTTTAATACTTCTATAATCTCTATGGTCAACACGGTAGTTTGTGCTGCTTCTTCGAAGGGACATGCTTTGGTAGACCACGACGAGGGAACAAGCACAGGAGAAACTTTAATATTTTTGCTTTTGCTTCATTACTTCGCCGTGAAAAGTTTGCATGCTATCCTACCAGGGTTTGTGGATTGGCAAAGTTTCCTTGTTTCAACGAAGCCATCGGAGCCACTGGCCTTCATTGGCATCCGTTGCCATGACTTGTGCAGACTCCTGCATTTTGGTTCTCCTGCAATCAAGATAGCTGCTTCTTATAGTCTGTTGGAGTTATTTAACAGAATATCAGATCAAATAAACAGTAATCATGAAGAGCTGAAATGTACTGTTGGGTACTTAATGTCCATAAGGAGTATATTGGAAGGGCTGGTCTTCTATAATGATCTGAGAGTGGCTACAAATTGTTGCCTCTGCCTGTCAATGATTCTGGGATGGGAAAATCTGACAAACAAAACCAGACTCTTAGAAGGGAGTAGGTGGTGTAGACTGATTATTGAGGAGATGACAGTATCTTTTGCAGCTCCCGCTTTAGCATCGCAATCATTCATGAACAAACAAAGTCCTCAAGTACTTATAGCTATAGCTATCCTGAAACTGCGTAAAATCCCTCAGTGGATGAGATCTGTGTTTGATAGTTCAAGTATATCTGGTATACTGGAAAATCTTACTGCAAGTAACTTGAGTTCGGAGATTTTGGTTTTATTTCGAGAACTACTGAAATCTAACTTCTTAAGTACGGAGCAAATTGCAACCATAAATCAAATTCTCCAGGAATGCAGAAAGCGCGTTTACACTAACAACGCTCAAGACGATCTCCCAAATGAGGCGATAAAGAAGGTCTTCACCGCATCGTATGACACGGGAGACATTTGCGATTTTCTGATTGATTTAATGACATCAGAGGCATACATAGATACGGTTTCCTTGGGATTTCATACGGGCAGTAAAAAGCTCTTAGAAGAAATAGAGATGTTTTACAGTTCCTTGTCTGTAGATGATGATGGTTGTAGGTAG 4107 0.4181 MYWCSDSRDVDVVDADGEGFPVSCSQGHRSSLNLQTHDGASICLVCFSNLLSNPLSPTVHVSYALSQISRSLSLPHFLQPLLTFHPHFLVSPLVAALSSFHDEPIAAQLTHLILALSASADPSVSCEFVSRVSDRITSGAFGWSSPQLHLLHCLGALLNGEKGDDLHKHIKDIGNLISVLVTGLQLPSEEIRGEVLFVLYKLSVLESTSAEADGSDMLIPFCPQILYLLVDVLMKTQNDDVRMNCIALLTMLARRHLLREECAYDTYNISSTERVDAKETEDGTKGASLVNLFAEAIKGPLLSSDSQVQIGTIDLLFHYLSSVKTSDYQIRVLVEENIADYLFEILRLSGEDQVLNLPNKYSLASMKAILILLCRILCILYSLVHCHNIKRKRLPYFRFISDRMEFKVGYLVLVEYKDPAVKMCLQVLDLLSTAEETFKPRLVVGISTLIPALHYVAEIPFHPVQCATLKLIYECISECPGSVSISQLEELILVLIRMLRKHSGGEMGMIPETFITVCSVFVALIRYPSCTGALDLSKSIGEATRHAILACLSVSERNVNQILQCLYLLKEAYAYSHDGNSSNSSKQELQSSILDTCSAYLLPWLVMGIKEMEEDIALGLLETFHSILLLQSSINATEYAETLISVGWFSFSYECLGLFTGDRMKNRIYLLLSSLMDSLLGNDSGQPIREAVLHLSHDPIDLLFLLGQRSSNSLDLPSCQSAVLLILYTSSLYDERLADEKLILASLEQYILLNRSDFHHRTTDNMTVTRLVNLYSLLRGLDNTNYPIHYSREAEEIIFQLINNDEWDLLSARIHSISLKWLFQQDDVINSLCHQTLKFCRSYNLEETDIIIGNNNQTVNVQTLAELVSTEDNYGARIFVCLLAQLLQAESHERDALCVLNVVATMVHAYPTACEQLSLHGIATTIRSWFYLSNSLSTTTYMSILILVFNTLSSVHPETLSADQSWVAVTMKMMEYSIPPEKVDILSDESLFVIGILSLILHLSTKKTLEETSKTILFNTSIISMVNTVVCAASSKGHALVDHDEGTSTGETLIFLLLLHYFAVKSLHAILPGFVDWQSFLVSTKPSEPLAFIGIRCHDLCRLLHFGSPAIKIAASYSLLELFNRISDQINSNHEELKCTVGYLMSIRSILEGLVFYNDLRVATNCCLCLSMILGWENLTNKTRLLEGSRWCRLIIEEMTVSFAAPALASQSFMNKQSPQVLIAIAILKLRKIPQWMRSVFDSSSISGILENLTASNLSSEILVLFRELLKSNFLSTEQIATINQILQECRKRVYTNNAQDDLPNEAIKKVFTASYDTGDICDFLIDLMTSEAYIDTVSLGFHTGSKKLLEEIEMFYSSLSVDDDGCR 1368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01468 1368 Gene3D - 36 379 IPR011989 -
Vimu6g01468 1368 PANTHER PROTEIN PRD1 19 352 IPR044968 GO:0042138
Vimu6g01468 1368 SUPERFAMILY ARM repeat 43 569 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01468 K25318 - gmx:100784718 2035.38