Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01454 ATGTCGCCACCGATTCCTATAAGCTCCAGCTATGCTTCCACCTTCTCTTATTCTGCTCACGTCTTTCCTTCCGTCTTTGCTCGCAGCAACTTCACCAGGATCAATCTTCATCCACCTGTCTTGTGCCAATTTGAATCTAAGGTCATTTTACTTCTTCGCTACTCCAACATTCTACAAATTCGCTTCACGTCCTCACATAATTCATGCCGACTTCGTCCTTGCTCCTATGACAACCTTGCCCGCACTGTTCGTATTTCTTTGTTTCTACAGTATACAGAGAAACCTCTGACAAGAAGGTGCGCCCCCTTTCTGGAAAGTTCATTACTATCTGGTAATGGCGTTGTGGCCTCAGACGAGTGGAAAACTGTTCCTGATATTTGGAGATCTTCTGCCGAGAAGTATGGTGACAAAATAGCATTAGTAGATCCGTATCATGATCCTCCTTCAACTATGACATATAAACAGTTGGAGGATGCAATATTGGACTTTGCTGAAGGGTTGAGAGTTATTGGAGTAAGACCCAGTGAAAAGCTTGCACTTTTTGCTGATAATTCTTGTCGCTGGCTTGTAGCTGATCAAGGTATGATGGCATGTGGGGCAATCAATGTGGTAAGGGGTTCGAGGTCATCAACTGAAGAACTGCTGCAAATATACAACCACTCTGAAAGTGTTGCACTAGCTGTGGACAATCCTGAAATGTGTAATCGGATGGCAAAGCTATTTTCTTTGAACAATTCAATGAGATTTATTATTCTGCTTTGGGGAGAAAAATCAGGCCTAGTCAGTGAAGGAGAAAAGGAGGTGCCTGTCTATACTTTCATGGAACTCATACATTTGGGACAAGAGAGTCGCAGAGTATTGTTTGATTCTCTTGATAATAGGAAGCAGTACATGTATGAAGCAATCAAATCTGATGACATTGCTACTCTTGTATACACAAGTGGAACTACTGGAAATCCAAAGGGTGTTATGCTAACGCATCAGAATCTTTTGCATCAGATAAGAAACTTAGGGGATATTGTACCTGCTGAAGTTGGGGATAGATTTCTAAGCATGTTGCCCTCCTGGCATGCATATGAAAGAGCTTCTGAATATTTTATCTTCTCGTGCGGTGTTGAACAAGTATACACAACTATGAGAAAGTTGAAGGATGATTTGAGAAGATATCAGCCACATTACTTGATTTCTGTCCCTTTAGTTTATGAAACTTTATACAGTGGGATCCAGAAGCAGATATCTACAAGCTCCCTTGTTAGAAAGCTTGTTGCACTCACATTTTTAAGGGCTAGCATGAGGTACATGGAATGCAGGCGTATTTATGAGGGTAAATGTCTAACGAAGGATCGGAAGCCGCCTTCTTATCTCCAATCAATGTTGGATTGGTTATGGGCTAGAATTATTGCGACAATATTGTTTCCAGTTCATTTGTTGGCGAAGAAACTGGTCTACAGTAAAATTCATTCAGCTATTGGAATTTCAAAGGAGTTTCAGCTCAAGGTTCACAGTCTACACTTCAATTTAACAAAGGGTCTGAATGAGAAGTTAGGTGAAATTCATATGGTTCCACTAAATTTGGAGTGTGACCAATATGATTTAATGCAACCGAATATAGCCTGTATTATAAACACAGAATTTCTTGGAAGGTGCTTGTACAAACCAAGCACGGCTTCTCTTTTGAAAGTGTATAATTGTGTGTTAATTCTGCCTTTGCAAAAGAGCAACGCAAGACCTGCAGTGTGTGGAAGATGGATGGATGTAGCTATGTATGGTCCCCTTTGGTTAGGAGGGTCTTTTTTGTTGTGGAGGAGAGCAACTGCCTGGGTTGTTCTAGAGGAGCCTAGGTCTGGGCAGTGGGATTTGTTATCCTTCTGTACCTTCCTTCCACTGGCAAATAATACAGATGCTGGAATAAGTGGTGGTGGTAGCCTATCATCTCACGTGGATAGATTTTTTGAGGCTATTGGCGTGACTGTGCAGAATGGATATGGTTTAACAGAAACCTCACCAGTTATTGCCGCTCGAAGACTTAGTTGTAATGTTATTGGGTCTGTTGGTCATCCAATTAAGCATACGGAATTCAAAATCGTAGATTCTGAGACTGATGAAGTTCTCCCACCTGGGACGAAGGGAATTTTGAAAGTTCGAGGTCCACAATTGATGAAGGGATACTACAAGAATCCTTCAGCTACAAATCAGGTCTTAGATAGGGATGGTTGGCTGAATACTGGGGATATTGGTTGGATTGTTCCCCATCATTCAACTGGGCGGAGTCGTAATTCCAGTGGAGTAATTGTTGTGGATGGTCGTGCTAAAGACACCATTGTGCTTTCTACAGAAGGTGAAAATGTTGAACCGGGAGAGATTGAAGAAGCTGCCATGAGGAGTAGCCTCATACATCAAATTGTTGTTATTGGACAGGATAAGCGACGTTTAGGGGCTGTCATTGTTCCTAACATTGAAGAAGTCCTAAAGGCAGCAAGGGAGTCATCAATTATAGATCCTAATAGTTCTGATGTCGGTCAGGAAAACGTGACCAGCCTAATATGTAAAGAATTAAGGACATGGACATCGGAGTTTCCATTTCAAATCGGACCAGTCCTTCTCGTAAATGACCCCTTCACGATTGATAATGGTCTTATGACACCCACCATGAAAATTCGAAGGGATAAAGTTGCGGTTCAATACAGTGATCAAATAGAGAATCTATACAAGTAA 2715 0.4162 MSPPIPISSSYASTFSYSAHVFPSVFARSNFTRINLHPPVLCQFESKVILLLRYSNILQIRFTSSHNSCRLRPCSYDNLARTVRISLFLQYTEKPLTRRCAPFLESSLLSGNGVVASDEWKTVPDIWRSSAEKYGDKIALVDPYHDPPSTMTYKQLEDAILDFAEGLRVIGVRPSEKLALFADNSCRWLVADQGMMACGAINVVRGSRSSTEELLQIYNHSESVALAVDNPEMCNRMAKLFSLNNSMRFIILLWGEKSGLVSEGEKEVPVYTFMELIHLGQESRRVLFDSLDNRKQYMYEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIRNLGDIVPAEVGDRFLSMLPSWHAYERASEYFIFSCGVEQVYTTMRKLKDDLRRYQPHYLISVPLVYETLYSGIQKQISTSSLVRKLVALTFLRASMRYMECRRIYEGKCLTKDRKPPSYLQSMLDWLWARIIATILFPVHLLAKKLVYSKIHSAIGISKEFQLKVHSLHFNLTKGLNEKLGEIHMVPLNLECDQYDLMQPNIACIINTEFLGRCLYKPSTASLLKVYNCVLILPLQKSNARPAVCGRWMDVAMYGPLWLGGSFLLWRRATAWVVLEEPRSGQWDLLSFCTFLPLANNTDAGISGGGSLSSHVDRFFEAIGVTVQNGYGLTETSPVIAARRLSCNVIGSVGHPIKHTEFKIVDSETDEVLPPGTKGILKVRGPQLMKGYYKNPSATNQVLDRDGWLNTGDIGWIVPHHSTGRSRNSSGVIVVDGRAKDTIVLSTEGENVEPGEIEEAAMRSSLIHQIVVIGQDKRRLGAVIVPNIEEVLKAARESSIIDPNSSDVGQENVTSLICKELRTWTSEFPFQIGPVLLVNDPFTIDNGLMTPTMKIRRDKVAVQYSDQIENLYK 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01454 904 ProSitePatterns Putative AMP-binding domain signature. 310 321 IPR020845 -
Vimu6g01454 904 Gene3D - 777 899 IPR045851 -
Vimu6g01454 904 Pfam AMP-binding enzyme 129 776 IPR000873 -
Vimu6g01454 904 SUPERFAMILY Acetyl-CoA synthetase-like 113 901 - -
Vimu6g01454 904 Gene3D Luciferase; Domain 3 678 748 - -
Vimu6g01454 904 Gene3D - 635 677 - -
Vimu6g01454 904 Gene3D - 114 440 IPR042099 -
Vimu6g01454 904 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 92 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01454 Vimu-Chr6 13954172 13966714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01454 633 903 Acyl Lipid Metabolism Gene Families AT4G14070 69.742 2.89e-125 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01454 K01897 - gmx:100782583 776.548