Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01452 ATGAGTAACGGCCATGGATGCTGCAAAACAGGGCCAGGCTACGCTTCACCGCTGAAAGCCATGTCTGGTCCAAGAGAGTCTCTCATTTATGTCACCGCTGTCTATTCAGGAACGGGAATTGAGAAGCCTGACTATTTGGCCACAGTCGACGTAGATCCAAACTCTCCCACTTATTCCAAAGTCATCCATAGGCTACCTGTTCCTTATTTGGGTGATGAATTGCATCACACTGGCTGGAATTCATGCAGCTCTTGCCATGGAGATCCGTCGGCTCAGCGACGATTTCTCATCGTGCCTGCGCTCGTATCGGGTCGCGTATATGTTATTGATGTGAAAACAAATCCAAAGGCTCCATCTTTGCACAAGGTTGTTGATCCTGCAGATATTATTGAGAAGACTGGATTAGCTTATCCACACACGTCTCACTGCCTTGCTTCTGGTGAGATTATGATCTCATGTCTTGGAGACAAGGATGGAAATGCTGAAGGCAATGGGTTTCTTCTTCTTGATTCAGAGTTTAACGTGAAAGGAAGGTACTATTCTAGATATTTGATTGAGAGTGTCGAAAATTTGCGGAGTGTACCTAACATTATTCACCCCTGCATGACTCTGTTAGATCCTCTAGTTTTAAATGCTTATCTTGGATTTAGTCCACAATATGGATATGACTTTTGGTACCAACCACGACACAACACTATGATAAGCACATCATGGGGTGCTCCCAGAGCTTTCACGAAAGGTTTTAACTTAGAGCATCTCTCTGAAGGATTATACGGCAGGCATCTCCATGTATATAACTGGCCTGGGGGCGAACTGAGACAAACACTGGACCTTGGTGATTCAGGGCTTCTACCCTTGGAGGATAGATATTGGAACTTTGTGTATCTGAAGCCTGTTTACTACCTGTGTGATTTAACTATGACTGCACTTTCCTCTTCCTTTGAAGTTGTAATTATAAGGTTCTTGCATGATCCTGCTAAAGATACAGGTTTTGTTGGGAGTGCATTGACAAGTAACATGATACGATTCTTCAAGAACCAAGATGGATCATGGAGCCATGAGGTTTCCATATCAGTGAAACCACTGAAAGTGCAAAACTGGATTCTTCCTGAAATGTCTGGGCTTATAACTGATTTTCTGATTTCTCTTGATGACCGGTTTCTGTACTTTGTAAACTGGCTTCACGGGGATATAAGGCAATACAACATTGAGGACGTTCAAAATCCTAAACTGACTGGACAAAAAGGAAGCCCTATTGTAGCTGTAACAGATAATGGAGAAACTTGGCAAGCCGAGGTTCCAGAGATTCAGGGGAAAAAGTTGAGAGCGGGCCCTCAGATGATTCAATTGAGTTTAGATGGAAAGCGGCTGTATGCAACAAACTCACTATTTAGTACATGGGACAAACAATTTTATCCAGATCTTGTCCAGCAGGGCTCCCACATAATACAGATTGATGTTGATACTGAGAAAGGTGGCCTGAAAATCAACCCCAACTTCTTCGTCGACTTTGGAACTGAGCCTCATGGTCCTTCTCTTGCACATGAGATGAGATATCCCGGTGGTGACTGTACTTCAGATATATGGATTTAA 1593 0.4338 MSNGHGCCKTGPGYASPLKAMSGPRESLIYVTAVYSGTGIEKPDYLATVDVDPNSPTYSKVIHRLPVPYLGDELHHTGWNSCSSCHGDPSAQRRFLIVPALVSGRVYVIDVKTNPKAPSLHKVVDPADIIEKTGLAYPHTSHCLASGEIMISCLGDKDGNAEGNGFLLLDSEFNVKGRYYSRYLIESVENLRSVPNIIHPCMTLLDPLVLNAYLGFSPQYGYDFWYQPRHNTMISTSWGAPRAFTKGFNLEHLSEGLYGRHLHVYNWPGGELRQTLDLGDSGLLPLEDRYWNFVYLKPVYYLCDLTMTALSSSFEVVIIRFLHDPAKDTGFVGSALTSNMIRFFKNQDGSWSHEVSISVKPLKVQNWILPEMSGLITDFLISLDDRFLYFVNWLHGDIRQYNIEDVQNPKLTGQKGSPIVAVTDNGETWQAEVPEIQGKKLRAGPQMIQLSLDGKRLYATNSLFSTWDKQFYPDLVQQGSHIIQIDVDTEKGGLKINPNFFVDFGTEPHGPSLAHEMRYPGGDCTSDIWI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01452 530 PANTHER METHANETHIOL OXIDASE 316 530 IPR008826 GO:0008430
Vimu6g01452 530 Pfam 56kDa selenium binding protein (SBP56) 316 530 IPR008826 GO:0008430
Vimu6g01452 530 Pfam 56kDa selenium binding protein (SBP56) 8 179 IPR008826 GO:0008430
Vimu6g01452 530 Pfam 56kDa selenium binding protein (SBP56) 218 290 IPR008826 GO:0008430
Vimu6g01452 530 SUPERFAMILY 3-carboxy-cis,cis-mucoante lactonizing enzyme 45 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01452 Vimu-Chr6 13945396 13948264 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01452 K17285 - gmx:100794235 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01452 6 13945396 13948264 Vimu6g01452 6 13945396 13948264 ECH