Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01450 ATGGAAAAATCAGCCCTGATCTTCAGAGGTTGCTACGACAACCACCACTTCTGCCTTGCAATTCTCTTCTCCTTTCTCTTCTGCTCTTTATTCCTATCATTTCGTGCTCCCAATAAGGCACTCACATTCAAACACCTGAACCCAGCCACCACCACTGATTCCTGCTTTGGCCGCTATGTTTATATCCACCAACTCCCTTCCCGCTTCAACGATGACTTACTTCACAATTGCCACACCCTTACCAGAGGCACTGATAAACCCAACATGTGCCCGTATATGCAAAACATGGGCTTGGGTCCTCAGATTCTTACCTCTCAAGGGGTTTTAACCAACAACACTTGGTATGCCACCAACCAATTCTTGCTGGAGGTCATTTTTCATAATAGGATGAGCAAATATGCTTGCTTGACCAACGATTCCTCCCTCGCCTCTGCAATCTTTGTCCCCTTTTATGCTGGTCTTGACGTTAGCCGTTTCCTTTGGCTCTCTAATCTCACTGACAGAGATTCCTCCGGTCGAGATCTTCTTCAATGGCTTGCAAACAGACCCGAGTGGAAGAAAATGTGGGGCAGAGACCATTTCCTTATTTCTGGGAGGATTGCTTGGGATTTTAGGAGACAGCGCGACGAGGAGTCCTATTGGGGTAGCAAGTTCAGATTTCTTCCTGAATCCATGAACATGTCCATGTTGGCAGTCGAAGCTAGTTCGTGGAATAACGACTATGCAATACCCTACCCAACTTCTTTCCATCCCTCGGATGACACTCAAGTTCTGCAATGGCAGAGAAAAATGAGACATCAAAAGCGGCCCTACTTGTTTACTTTCACCGGAGCTCCAAGGCCCGAGCTTGAAGGCTCTATCAGGGGTAAGATCATAGACCAGTGTCGAGCTTCGAGTGTTTGCAAATTCGTGGACTGCAGCTATGGTGTGGAGAGATGTGACGACCCTGTCAATGTTATAAAGGTGTTTCGAAGTTCTGTGTTCTGTTTGCAGCCTCCCGGTGACTCATACACCAGAAGGTCCATTTTTGATTCTATGTTGGCCGGTTGTATTCCCGTTTTCTTTCATCCAGGCACTGCTTATTCACAGTACAAGTGGCATTTGCCTAAGAACAGGACAGGGTACTCTGTATATATACCGGTGAAGGATGTAAAACAATGGAATACCAGTGTGGAAGAGGTGTTGCTGGGGATTTCAGAGAGTGAGGTCTTAGCAATGAGGGAGGAGGTTATAAAGGTGATTCCAAATATTATTTATGCGGATCCCAGGTCAAAGTTAGATTTCTTCGAAGACGCGTTTGATTTAGCAGTAAAAGGAATGCTTGAAAGAATAGAGAAGGTGAGGGAGGCGACAAGGAGAGGGAGAGATCCCAGCATTGGTTTTGCAGACGAAGACCATTATAAGTATACATTTTCACAAAGTTACAGCTAA 1431 0.457 MEKSALIFRGCYDNHHFCLAILFSFLFCSLFLSFRAPNKALTFKHLNPATTTDSCFGRYVYIHQLPSRFNDDLLHNCHTLTRGTDKPNMCPYMQNMGLGPQILTSQGVLTNNTWYATNQFLLEVIFHNRMSKYACLTNDSSLASAIFVPFYAGLDVSRFLWLSNLTDRDSSGRDLLQWLANRPEWKKMWGRDHFLISGRIAWDFRRQRDEESYWGSKFRFLPESMNMSMLAVEASSWNNDYAIPYPTSFHPSDDTQVLQWQRKMRHQKRPYLFTFTGAPRPELEGSIRGKIIDQCRASSVCKFVDCSYGVERCDDPVNVIKVFRSSVFCLQPPGDSYTRRSIFDSMLAGCIPVFFHPGTAYSQYKWHLPKNRTGYSVYIPVKDVKQWNTSVEEVLLGISESEVLAMREEVIKVIPNIIYADPRSKLDFFEDAFDLAVKGMLERIEKVREATRRGRDPSIGFADEDHYKYTFSQSYS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01450 476 Pfam Exostosin family 55 394 IPR040911 -
Vimu6g01450 476 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 59 439 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01450 Vimu-Chr6 13938090 13939520 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01450 - - gmx:100780962 843.958