Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01435 ATGCCAGGTCAAACCACCTTTTGGATCGGACATATCTTGGCCCTGCCGACACGTTGCGTCTTCATTGGCTCTAGCTTTATAGTTAAGAAAATGGGCCTTATAAAAGCAGCCAGCAACGGCAAACGAGCAGCCACCGGAGGGCATTCCTATCTGTTCGAACCCTTTTGGTGGCTCGGAATGATTTCAATGATCGGTGGGGAAATAGCCAATTTTGCAGCTTATGCATTCGCTCCTGCCATCCTTGTAACTCCTTTGGGAGCTTTAAGCATCATTTTCAGCTCAGTGCTAGCTCACTTCATATTGAAAGAGAGATTGCACATCTTTGGCGTGCTTGGGTGTGCCCTGTGTATGGTGGGATCTACGACAATTGTTTTGCATGCACCGCATGAAAAAGACATTCATTCTGTGAAGGAAGTGTGGGAACTTGCTACAGAACCAGGTTTTCTTGTGTACATTTGCGTTGTTGCGGTAGCAGTTTGCGTCCTTATTTTCCGCTTTGTGAAATCCCATGGGCAGAAAAATATGATGGTATATATTGGAATATGTTCTCTCATCGGTTCCATCACGGTTATGGGAGTCAAAGCAGTCGGAATTGCTTTGAAGCTCACATTCGAAGGGATGAATCAGTTTATTTTCTTTGAAACCTGGCTATTTACAGTGGTTGTCATAGGATGTTGCCTTACACAGATCAACTACTTGAACAAGGCTTTGGACACCTTTAACACTGCTGTGGTGTCACCAGTTTACTACGTCATGTTCACATCATTTACAATAGTGGCCAGCGTTATCATGTTTAAGGAATGGGCGAAGCAGGATGCATCGCAGATTGCTACCGAGTTGTGTGGGTTTGTGACAATTTTATCAGGGACCTTCCTCCTTCACAGAACTAAGGATATGGGAAATAGACCCTCCGAAGTTCATTCAAGTTCCGATCCACTACAATGTCCTGATAGTACTAAGACATCTCAAACCAGCGAAATTTGA 984 0.4431 MPGQTTFWIGHILALPTRCVFIGSSFIVKKMGLIKAASNGKRAATGGHSYLFEPFWWLGMISMIGGEIANFAAYAFAPAILVTPLGALSIIFSSVLAHFILKERLHIFGVLGCALCMVGSTTIVLHAPHEKDIHSVKEVWELATEPGFLVYICVVAVAVCVLIFRFVKSHGQKNMMVYIGICSLIGSITVMGVKAVGIALKLTFEGMNQFIFFETWLFTVVVIGCCLTQINYLNKALDTFNTAVVSPVYYVMFTSFTIVASVIMFKEWAKQDASQIATELCGFVTILSGTFLLHRTKDMGNRPSEVHSSSDPLQCPDSTKTSQTSEI 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01435 327 MobiDBLite consensus disorder prediction 305 327 - -
Vimu6g01435 327 MobiDBLite consensus disorder prediction 302 327 - -
Vimu6g01435 327 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 128 - -
Vimu6g01435 327 Pfam Magnesium transporter NIPA 6 299 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vimu6g01435 327 PANTHER UNCHARACTERIZED 7 314 IPR008521 GO:0015095|GO:0015693|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01435 Vimu-Chr6 13871215 13872950 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01435 K22733 - gmx:100785617 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01435 6 13871215 13872950 Vimu6g01435 6 13871215 13872950 ECH