Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01430 ATGGGTTATTGGGTTAGATTGTGTTTGTCAGTGTTGTACTTCTCACTAATTTCACTAAGTTCAGCGATTGTTGATGCTGACAATGATGACTATGAAGTTCCCATCCCAAGCACTCTGGATGGACCCTTCAAGCCTGTCACCGTTCCTCTTGACAAGACCTTCCGAGGAAACGCCATGGATTTGCCACACACCGATCCTCTGCTTCAAACAACCGCTCAAGGCTTCCAACCACAGCAGATATCTCTCTCCCTCTCCTCTTCTCATCACTCTGTTTCCATTTCTTGGATTACAGGGGAATTCCAAATTGGGGACAACGTAGAACCCTTAGATCCTAACAGTGTTGCGAGCGTAGTTCGATATGGAAGGTTCCGAAGGTCCATGAGTCACCGAGCCACGGGTTATTCCCTCGTTTACAGTCAACTTTATCCTTTTGAAGGTCTTCAGAACTACACCTCTGGTATCATACATCACGTTCGTCTCACAGGTCTGAGACCCAACACACTCTATCAATATGAATGCGGAGATCCTTCTTTGTCAGCTATGAGTGATGTTCATTACTTCAGGACTATGCCAGTTTCTGGCCCCAAGAGCTACCCTAACAGAATAGCAGTGGTTGGAGACCTGGGTCTTACGTACAATACCACATCCACTTTTGACCACCTCACCAGTAACCATCCCGATCTTATTTTGTTGGTTGGAGATGTTACTTATGCCGATCTTTATCTGACTAATGGTACTGGAGCGGACTGCTATTCTTGCGCATTTCCTGACACTCCCATCCATGAAACGTATCAACCTCGTTGGGATTACTGGGGAAGGTACATGCAGCCTCTGATTTCTAGTGTCCCTATAATGGTAATAGAAGGGGATCATGACATAGAACCACAAGCTGAAAACCAGACATTTGTTGCTTATAGTTCTCGATTTGCTTTCCCATCAGAAGAGAGTGGATCATCATCCACTTTATATTATTCTTTCAAAGCTGGAGGGATACATTTTATAATGCTCGGCTCCTACACATCGTATGACAAATCAGGGGACCAGTACAAGTGGCTGGAGAGGGACTTGGCTTCTGTTGACAGGGAAGTAACTCCGTGGTTGGTAGCCACATGGCATGCACCTTGGTACAGCACCTACAAGGCACATTATAGAGAAGCAGAGTGTATGAGGGTAGAGATGGAAGACTTGCTATATGAATATGGCGTTGACATTGTCTTCAATGGACATGTTAATGCGTATGAGAGATCAAACGGGGTATACAACTACACATTGGATCCTTGTGGACCTGTTTATATCACGGTTGGTGATGGTGGTAACAGGGAAAAGATGGCAACCACACATGCTGATGAACCTGGAGAGTGTCCAGAACCATCAACTACACCAGGTGACTTTCTGGGTGGCTTCTGCGCCTTTAATTTCACATCCGGCCCAGCGGCAGGTAACTTCTGCTGGGATAGACAGCCTGATTACAGTGCTTTCAGAGAAAGTAGCTTTGGTCATGGCATTTTGGAGGTATACCTCATCTTTCTTTCACCACTCTTCGCGCCCTTTTTATGGAGAGATATTGTTAAGACTGTGAAAAATGAAACGCATGCACTGTGGATTTGGCATCGCAATCAAGACTTTTATGAGAGTGCCGGAGACGAGATTTACATCGTTAGGCAACCTCAAAACTGCCCACTTTGGGGTAGAATTTTGAGGGATTTGAGGGTTCACTCCTGCAACATCCCCGCCTTCCCCGCCTTGGATTGGAGTAGTTGTTGTTGA 1767 0.4573 MGYWVRLCLSVLYFSLISLSSAIVDADNDDYEVPIPSTLDGPFKPVTVPLDKTFRGNAMDLPHTDPLLQTTAQGFQPQQISLSLSSSHHSVSISWITGEFQIGDNVEPLDPNSVASVVRYGRFRRSMSHRATGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGLRPNTLYQYECGDPSLSAMSDVHYFRTMPVSGPKSYPNRIAVVGDLGLTYNTTSTFDHLTSNHPDLILLVGDVTYADLYLTNGTGADCYSCAFPDTPIHETYQPRWDYWGRYMQPLISSVPIMVIEGDHDIEPQAENQTFVAYSSRFAFPSEESGSSSTLYYSFKAGGIHFIMLGSYTSYDKSGDQYKWLERDLASVDREVTPWLVATWHAPWYSTYKAHYREAECMRVEMEDLLYEYGVDIVFNGHVNAYERSNGVYNYTLDPCGPVYITVGDGGNREKMATTHADEPGECPEPSTTPGDFLGGFCAFNFTSGPAAGNFCWDRQPDYSAFRESSFGHGILEVYLIFLSPLFAPFLWRDIVKTVKNETHALWIWHRNQDFYESAGDEIYIVRQPQNCPLWGRILRDLRVHSCNIPAFPALDWSSCC 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01430 588 SUPERFAMILY Purple acid phosphatase, N-terminal domain 55 191 IPR008963 GO:0003993|GO:0046872
Vimu6g01430 588 Gene3D - 76 192 - -
Vimu6g01430 588 PANTHER ACID PHOSPHATASE RELATED 19 557 IPR039331 GO:0003993
Vimu6g01430 588 FunFam Purple acid phosphatase 196 458 - -
Vimu6g01430 588 Pfam Purple acid Phosphatase, N-terminal domain 77 189 IPR015914 GO:0003993|GO:0046872
Vimu6g01430 588 CDD MPP_PAPs 196 554 IPR041792 -
Vimu6g01430 588 Pfam Calcineurin-like phosphoesterase 201 410 IPR004843 GO:0016787
Vimu6g01430 588 SUPERFAMILY Metallo-dependent phosphatases 200 505 IPR029052 -
Vimu6g01430 588 Gene3D - 196 460 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01430 Vimu-Chr6 13817865 13820877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01430 61 439 Miscellaneous Gene Families AT2G03450 25.792 3.40e-21 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01430 K22390 - gmx:100784006 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01430 6 13817865 13820877 Vimu6g01430 6 13817865 13820877 ECH