Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01429 ATGAGGAATAGCTGGCGACGAGATGTAGAACCTGTGATGAGGAATGGCTGGCGACGAAGAGCTCTCGAGAGAGAGATCGAAGACGGAGACGCGAAACAGAGAGTTCGCGAGAGTGGAAAATGTTCTCTCGAATATTACAAAAATGCTAAAAGAATGTCACATGTTGAAGATGCAAATGAGAGCAAAGAAGCAAGACTGTCAATTGAGAGTAAAGCAACTGGAATGGGAATGGTGGTGGCAGTGACGGTTACAGTGACGGCAATGGTAATGGAGATGGTGGGAGGAGGGAGTTGGTGCGTGGCAAAGATTGGAGTGAGTGAGGAAGTACTGCAGAGAGCATTGGACTCTGCATGTGGAGATGGCGGAGCCGATTGCGCTCCCATTCAGCCTAACAGCCTTTGCTTCTCTCCCAACACCCTTCAAGCTCACGCTTCCTACGCCTTCAACAGCTTTTACCAGCGAAACGGAAGAGCTTCTAACGCCTGCCTCTTCGATGGCGCTTCCACCATCGCCCAAACAGATCCCAGTTCGTGCCCTTCTTACTACACCATGTCGTTTATAATGATCTTTTCCAACTTCTCACTCACTGTTTATGTTTACACAGGCTATGGATCTTGCGTGTACCCGTCCTCTGCAATCCCAACTCCAACCGCCAGCTGGTTTGAACAGTGGGCAGTTTTGAGGTTGCCTAACGATGTAAATCTCGTCTCCGGCACTCTCATAAAAGTCTTGATTGCGATGCCAAATCCACAGTGCATGCGTTTCATTTTTCACCTATAA 780 0.4859 MRNSWRRDVEPVMRNGWRRRALEREIEDGDAKQRVRESGKCSLEYYKNAKRMSHVEDANESKEARLSIESKATGMGMVVAVTVTVTAMVMEMVGGGSWCVAKIGVSEEVLQRALDSACGDGGADCAPIQPNSLCFSPNTLQAHASYAFNSFYQRNGRASNACLFDGASTIAQTDPSSCPSYYTMSFIMIFSNFSLTVYVYTGYGSCVYPSSAIPTPTASWFEQWAVLRLPNDVNLVSGTLIKVLIAMPNPQCMRFIFHL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01429 259 PANTHER BETA-1,3 GLUCANASE 87 210 IPR044788 -
Vimu6g01429 259 SMART X8_cls 97 180 IPR012946 -
Vimu6g01429 259 Pfam X8 domain 98 168 IPR012946 -
Vimu6g01429 259 Gene3D - 91 188 - -
Vimu6g01429 259 FunFam Glucan endo-1,3-beta-glucosidase 4 92 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01429 Vimu-Chr6 13810027 13818427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01429 85 175 Glycoside Hydrolase AT2G05790 51.648 2.70e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01429 - - var:108320750 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01429 6 13810027 13818427 Vimu6g01429 6 13810027 13818427 ECH