Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01418 ATGGTCACGAGCACAATGACGAGCGCTTGTATGACATCAATCACCATAACCAGTCTCAGTTTCCCTCGCTACCGCTCTCGCTGTTACTCTCCAGTTCAAAATAAAATTCATTTTCCCCGTCGATTCTTTTCCAAATTAAACATTGATGCGGAGGACGAGGTTCAGACCCGCGTTTGGAATTGGAGGGGTTACTCTATTCGCTATCAACATTCTGGGAACAATGGCCCTGCGCTGCTTTTAGTCCACGGTTTTGGAGCTAACAGTGACCACTGGAGGAACAACATTTCAGTTCTTGCTCAATCTCACCGGGTCTACGCCATTGATCTCATTGGATACGGATATTCAGATAAACCAAATCCTCGTCAAATACGAGACCATTCTTTTTACACTTTCGAAACGTGGGCCTCTCAATTAAATGAGTTTTGTCTTGATGTCATAAAGGATGAAGCATTCTTTTTATGCAATTCTATTGGAGGAGTTGTTGGTCTTAAAGCAGCTGTGGTAGCACCACACATTTGCCGGGGCATTATCCTTCTCAATATATCTCTGCGTATGCTTCATATAAAGAAGCAGCCTTGGTATGGAAAGCCTTTCATCAGATCATTCCAGAGATTGCTTAGGGATACTGCTTTAGGAAAATTCTTCTATAAAACTGTTGCCACAAAAGAATCTGTAAGGAACATTCTTTGCCAGTGTTATCATGACACCTCCAAGGTGACAGATGAGCTAGTGCAGATCATCCTTGGTCCAGGTCTGGAACCTGGAGCTGCAGAGGTATTTCTTGAGTTCATTTGCTATTCAGGTGGTCCTCTTCCCGAGGAACTACTACCTCAAGTAAAGTGCCCAGTTCTGATAGCATGGGGTGACAAGGATCCTTGGGAACCAATTGAGATTGGAAGAAATTATGAAAATTTTGATTCTGTTGAAGACTTCATTGTCCTTCCTAATGTTGGACACTGCCCCCAGGATGAGGCACCTCATCTTGTGAACCCACTCGTAGAGTCATTTGTGGCACGACATGCTGAATCCTCGCCCAGTACCTCAATTGTTAATTGA 1056 0.4375 MVTSTMTSACMTSITITSLSFPRYRSRCYSPVQNKIHFPRRFFSKLNIDAEDEVQTRVWNWRGYSIRYQHSGNNGPALLLVHGFGANSDHWRNNISVLAQSHRVYAIDLIGYGYSDKPNPRQIRDHSFYTFETWASQLNEFCLDVIKDEAFFLCNSIGGVVGLKAAVVAPHICRGIILLNISLRMLHIKKQPWYGKPFIRSFQRLLRDTALGKFFYKTVATKESVRNILCQCYHDTSKVTDELVQIILGPGLEPGAAEVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEIGRNYENFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVARHAESSPSTSIVN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01418 351 PANTHER HYDROLASE 53 342 - -
Vimu6g01418 351 Pfam Alpha/beta hydrolase family 78 330 IPR000073 -
Vimu6g01418 351 SUPERFAMILY alpha/beta-Hydrolases 54 337 IPR029058 -
Vimu6g01418 351 FunFam Os07g0575800 protein 146 340 - -
Vimu6g01418 351 Gene3D alpha/beta hydrolase 43 343 IPR029058 -
Vimu6g01418 351 PRINTS Alpha/beta hydrolase fold signature 101 116 IPR000073 -
Vimu6g01418 351 PRINTS Alpha/beta hydrolase fold signature 283 297 IPR000073 -
Vimu6g01418 351 PRINTS Alpha/beta hydrolase fold signature 152 165 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01418 Vimu-Chr6 13740538 13743297 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01418 29 339 Miscellaneous Gene Families AT1G80280 23.780 2.97e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01418 - - gmx:100818723 621.313