Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01405 ATGAAGAGCTCTCTGAGGAAATTGCGAGGTCTGGCGCTTCACAATCACAACCACAACCGCACTCGCAAGGATGACTCCTCCAACTCCATTCAACCTCTGGGCCAGCTTGACGAGCTTGCTCGGGCCACCCAGGCACGCACGCCTCCACATTCGCATTTCTCTTTCCATCTCTACATGAGGGACTGCTATGACACCTTGCTTTCCGCCGCTGCTGCAACCGCCAGCAGTGCCTATGAATTCTCTGAGTCCTTGCGAGACATGGGCTCTTGTCTTCTCGAGAAGACCGCTTTAAATGACCACGCAGATGAAACTGGCACTCTACTCTTCTTTTACTTCTTCTTCCACTTCCGCACGCACTTCATCACCTTTTTTATTTTTTTCTCTTCCCTAACCCCTTCCGTTGTTCTTTTCCATTCTGTTATTGCAGGAAAGCTTCTCCTCACGCTTGGCAAAATTCAGTTCAAACTCCACAAACTAATTGATGACTACCGTTCTCATATAATCCAGACAATTACCGTTCCCTCGGAGTCTCTCTTGAATGAACTTCGAATTGTTGAGGAGATGAAGCGGCAATGTGATGAGAAAAGAGACGTATATGACTATATGGTAGCAAGATACAGAGAAGGAGGCAGGTCTAAAGGCGGGAAAGGGGAAACTTTTTCTTTGCAGCAGTTGCAAACTGCTCATGATGAATATGATGAAGAGGCTACTTTGTTTGTTTTCCGATTGAAATCTCTGAAGCAAGGACAATCGCGTAGTCTTCTAACACAGGCAACGCGTCACCATGCTTCTCAGTTGTGTTTTTTCAAGAAAGCAGTCAAGTCCCTTGAGACAGTAGAACCACATGTAAAATCTGTAACTGAACAGCAGCACATTGATTACCAGTTCAGTGGTCTTGAAGAGGAGGATGGGTATGAAGGTGACGATGGAGATGATGGTGGTGGTGGTTATGATGACAATGATGATGGTGAGCTGAGTTTTGACTATGGACAAACTGAACAAGACCGAGATGTTTCTACGTCACGAAACTCCATGGAGCTGGATCAAGTGGAAGTTACAGCTCCTGGAGGTTTTACATCCGAAACTGCCAAGGAAAACTTAGACAAACTTCAAAGGAATTTGTTTTCCTTTAGGGTAAGGACAGGGAGCCAATCTGCCCCGCTTTTTGCTGATAAACCTGATGCAATTGAAAAACTGAGGCAGATGCGCCCATCTTTATCTCGGAAGTTTAGTTCATATGTGCTACCCACACCCGTTGATGCTAAGAGTTCAATCTCTTCAAGTTCAAATAATCCAAAACCATCCAAAGTGCAGGCAAATTTAAGTGAACCTACAAAGAACTTGTGGCATTCATCCCCATTAGAACAAAAGAAACATGAAAAAGATAGCGGTGATGAATTTTCTGGTTCCATTGTCAGAAGTGCTCAGTCAGTACACAAGGAAAGTAACAGTAATACTGCCACCACGAGATTGCCTCTTCCTCTAGCAGATAATCTTTTATCCTCGAACCGGGATTACATTTCTGCTCACTCTAAAAAGATTAAAAGATATGCCTTTTCTGGCCCATTGACAAGTAATCCTGGGCCTACCAGGCCGGTTTTGTTAGAAAGTGTTCAACTGTTCTCTGGACCTCTTTTGCCAAGTTCAATCCCTCAGCCTCGGTCATCATCTCCAAAAGTATCTCCCACTGCTTCTCCCACTCTAGTGTCTTCACCCAAAATAAGTGAGCTTCATGAACTTCCTAGGCCTCCAACCAATTTCCCATCCAATTCAAGGCTTTTAGGTTTGGTGGGTCATTCTGGTCCTTTGTTGTCTGGAGGTCAAAAGGTTTCCTCTGCAAATAATTTGGCTGCATCAAGTGCTGCATCTCCATTGCCAATGCCACCTCAGGCCATGGCTCGTAGTTTCTCCATACCTTCTAGTGGGGCTAGAGTTGCAGCATTACATGTTCCTAGAACACTAGATTCTTCTCATGGATCATCTATATCTGAGACTATTGCTTCTCCTCTGATACCACTAGCATTATCTAGTAGTCAGCCATCATCAGATTGCTGA 2055 0.4462 MKSSLRKLRGLALHNHNHNRTRKDDSSNSIQPLGQLDELARATQARTPPHSHFSFHLYMRDCYDTLLSAAAATASSAYEFSESLRDMGSCLLEKTALNDHADETGTLLFFYFFFHFRTHFITFFIFFSSLTPSVVLFHSVIAGKLLLTLGKIQFKLHKLIDDYRSHIIQTITVPSESLLNELRIVEEMKRQCDEKRDVYDYMVARYREGGRSKGGKGETFSLQQLQTAHDEYDEEATLFVFRLKSLKQGQSRSLLTQATRHHASQLCFFKKAVKSLETVEPHVKSVTEQQHIDYQFSGLEEEDGYEGDDGDDGGGGYDDNDDGELSFDYGQTEQDRDVSTSRNSMELDQVEVTAPGGFTSETAKENLDKLQRNLFSFRVRTGSQSAPLFADKPDAIEKLRQMRPSLSRKFSSYVLPTPVDAKSSISSSSNNPKPSKVQANLSEPTKNLWHSSPLEQKKHEKDSGDEFSGSIVRSAQSVHKESNSNTATTRLPLPLADNLLSSNRDYISAHSKKIKRYAFSGPLTSNPGPTRPVLLESVQLFSGPLLPSSIPQPRSSSPKVSPTASPTLVSSPKISELHELPRPPTNFPSNSRLLGLVGHSGPLLSGGQKVSSANNLAASSAASPLPMPPQAMARSFSIPSSGARVAALHVPRTLDSSHGSSISETIASPLIPLALSSSQPSSDC 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01405 684 MobiDBLite consensus disorder prediction 469 489 - -
Vimu6g01405 684 MobiDBLite consensus disorder prediction 546 593 - -
Vimu6g01405 684 MobiDBLite consensus disorder prediction 420 451 - -
Vimu6g01405 684 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 108 IPR037488 -
Vimu6g01405 684 MobiDBLite consensus disorder prediction 332 348 - -
Vimu6g01405 684 SUPERFAMILY BAR/IMD domain-like 59 285 IPR027267 -
Vimu6g01405 684 Gene3D Arfaptin homology (AH) domain/BAR domain 58 302 IPR027267 -
Vimu6g01405 684 MobiDBLite consensus disorder prediction 300 328 - -
Vimu6g01405 684 CDD BAR 143 282 - -
Vimu6g01405 684 MobiDBLite consensus disorder prediction 546 572 - -
Vimu6g01405 684 MobiDBLite consensus disorder prediction 300 362 - -
Vimu6g01405 684 MobiDBLite consensus disorder prediction 452 467 - -
Vimu6g01405 684 MobiDBLite consensus disorder prediction 420 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01405 Vimu-Chr6 13569992 13573425 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01405 - - vun:114183484 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01405 6 13569992 13573425 Vimu6g01405 6 13569992 13573425 ECH