Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01198 ATGGAAGAAGACCAAATGGAGAGAGTGGTTAGGCTCGCCTCTCAGAGTGCTGTGGTGATTTTCAGTGTCAGTAGCTGTTGCATGTGCCATGCAATGAAGAGGCTCTTCTGTGGCATGGGGGTTAACCCCACTGTTCATGAGCTTGACCAAGACCCCAAAGGAAAAGACATGGAGAGAGCACTCATGAGGCTTCTTGGAAACGGAATCAACACCACTGCTGCAGTTGTTCCTGTCGTCTTCATTGGAGGAAAACTTGTTGGTTCCATGGACAGGGTTTTGGCTTTCCACATCAGTGGCACCCTTGTCCCTCTTCTCAAACAAGCTGGAGCTTTGTGGCTTTGA 342 0.4942 MEEDQMERVVRLASQSAVVIFSVSSCCMCHAMKRLFCGMGVNPTVHELDQDPKGKDMERALMRLLGNGINTTAAVVPVVFIGGKLVGSMDRVLAFHISGTLVPLLKQAGALWL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01198 113 PANTHER GLUTAREDOXIN 6 113 IPR011905 -
Vimu6g01198 113 Pfam Glutaredoxin 18 86 IPR002109 -
Vimu6g01198 113 SUPERFAMILY Thioredoxin-like 6 112 IPR036249 -
Vimu6g01198 113 NCBIfam glutaredoxin-like family 9 113 IPR011905 -
Vimu6g01198 113 CDD GRX_GRXh_1_2_like 17 104 - -
Vimu6g01198 113 ProSiteProfiles Glutaredoxin domain profile. 6 112 - -
Vimu6g01198 113 FunFam Glutaredoxin family protein 6 112 - -
Vimu6g01198 113 Gene3D Glutaredoxin 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01198 Vimu-Chr6 12188832 12189173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01198 8 113 Miscellaneous Gene Families AT3G02000 68.868 2.95e-45 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01198 K03676 - gmx:100797942 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01198 6 12188832 12189173 Vimu6g01198 6 12188832 12189173 ECH