Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01196 ATGATGCAGATGAAGAACAGCCCTATTCATTGGAGCACGGCTGAGCCTGATTATTACAGAGTACCATCCAAGGTGGTTTCCATTCCTGTTTACTTCGTTGGTTCAGAACGCGCCAGAACCGATTCTGCCATAAAGATTCAGAGGATGTTGAGAGGGTTCCTTGTGAGGAACGCGATGAAGAAGATCGCAGCCATGAGGGTGGAGTTGGAGCGGATCGAGAGCGGGATTCAAGTGGAAGTGCTGAGGAGGGAGCAAAAGGAGAGGGTGAGGGTGATCGAAACCATCATGAACTTGCTTCTTAGGCTGGATTCTGTTCGGGTGTTGCACTACTCTGGCCTCAGGGAGTGCAGAAAGTCTGTCATAAAAAAAGCTATTGCTGTTCAAGAAATGCTTGATGAAATGTCTGTTCCGGCTTCAGAGAAAGAGGAGGAGAAAGAAGTGAAAAAAGAGAGGGAGGTTGATTGTGGGGTGGGAGAAGATGATTGTTTGGTGAAGGAAGATGAAGGCAATGTAATGGAAAGTTTGCAGAACGAGAGTGGGTGCATGGAAGAAGAAAGCATTGGGTTGGAAACAAGTTTGGTTGAGGGAAAAGAGGGTGAAGTTATATATGAGGAGCAAGAGAAAATTGAAGGTTTGAAAAACGAGGAGGTGGAAGAGAAGGAAGATGGTGAAGAAGGAAAGAGTTTGGTGAAAGAGGGGAAAGGGAATTGTGAAAGAGAGGAAGGAGATGGGAAGAAGATGGAGTTGTTGTTAGAGAAGCTTGTGGAAGACAAGCAGAAGATGATGGAGATGATGTTGCAGCTTTTTCAGAGGAACGAAACACAGACTACAATTCTCACCTCTCTCTCTCAAAGGGTGGAGCAGCTTGAGAGAGCCTTTGTCAGTGAGAAGTTGAGGAGGAAGAAAAATGTCAAAAAGAAGCACTCTTGCCCTAAAAATGGCTTCCACTGA 951 0.4564 MMQMKNSPIHWSTAEPDYYRVPSKVVSIPVYFVGSERARTDSAIKIQRMLRGFLVRNAMKKIAAMRVELERIESGIQVEVLRREQKERVRVIETIMNLLLRLDSVRVLHYSGLRECRKSVIKKAIAVQEMLDEMSVPASEKEEEKEVKKEREVDCGVGEDDCLVKEDEGNVMESLQNESGCMEEESIGLETSLVEGKEGEVIYEEQEKIEGLKNEEVEEKEDGEEGKSLVKEGKGNCEREEGDGKKMELLLEKLVEDKQKMMEMMLQLFQRNETQTTILTSLSQRVEQLERAFVSEKLRRKKNVKKKHSCPKNGFH 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01196 316 MobiDBLite consensus disorder prediction 223 241 - -
Vimu6g01196 316 Pfam IQ calmodulin-binding motif 40 59 IPR000048 GO:0005515
Vimu6g01196 316 Coils Coil 202 222 - -
Vimu6g01196 316 Gene3D BAG domain 47 140 IPR036533 GO:0051087
Vimu6g01196 316 SMART BAG_1 58 135 IPR003103 GO:0051087
Vimu6g01196 316 SUPERFAMILY BAG domain 57 133 IPR036533 GO:0051087
Vimu6g01196 316 Pfam BAG domain 77 133 IPR003103 GO:0051087
Vimu6g01196 316 ProSiteProfiles IQ motif profile. 39 68 IPR000048 GO:0005515
Vimu6g01196 316 MobiDBLite consensus disorder prediction 214 241 - -
Vimu6g01196 316 ProSiteProfiles BAG domain profile. 58 135 IPR003103 GO:0051087
Vimu6g01196 316 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 24 309 IPR040400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01196 Vimu-Chr6 12183196 12184146 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01196 - - vun:114185998 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01196 6 12183196 12184146 Vimu6g01196 6 12183196 12184146 ECH