Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01195 ATGGCGTTGAGGTTGAGTACTGTGGTTTCAGGTTTTGGTCCGAGACATTCGAGTAAACCTAGGTTAAAGTTGAGGTTCGGAATCAGAAGTGGTTGTTGTGCTACAGTTACGAACATGGCCTTCACTGAAACCCCTTCAACTTCCAAAGTCATTGATTCCCATCTCCACGTGTGGGCTTCACCTCAAGAGGCTGGTAGATTCCCTTATTTTCCTGGTCAAGAACCCACTTTACAAGGAAATGCCGATTTTTTGCTCCAGTGTATGGAGGAGGCAGGAGTAGATGGTGCACTCATTGTGCAACCAATTAATCATAAATTTGATCATAGTTACGTCACAAGCATTGATGTGTTTTCCAATGCTGGAATTGCCAAGGAAAGGAAAATAGGGGAGAAGAAAGGGAGAAATTCTGATAACACAATAATGGCAATGCTTGATAAGATTAGACATTCTGGTTATTATATTGTGCCACTCTTGTCATTCTGTTCATTGAACAGCGTTTTGAAGAAATACCCGACCAAATTTGTTGGCTGTTGCCTTGCTAATCCAGCTGATGATGGAAGTGGGCTTAAGCAATTTGAAGATCTTGTTTTGAAGGATGGTTACCGTGCTGTTCGATTTAATCCGTATTTGTGGCCAACCGGAGAAAAGGCATGCAAACTGATTTCTCTGACATATCTGCTTATGACAAATAAAGTTGGAAAGGCAATTTTCCAAAGGGCTGGAGAACTCAATGTAGCAGTGGGCTTCATGTGTATGAAGGGGCTTGGTCTGCATATTTCTGAAATTGAGAAACTGTGCACAGAATTTCCATCAACAGTAGTATTGCTTGACCATTTGGCCTTTTGCAAACCACCAATAAATGATGAGGAAGCTCTTGTCTTTTCTCAACTTTTAAATCTGTCTAGATTCCCACAAGTACATGTGAAATTTAGTGCCCTTTTCAGAGTGTCAAGAGGACAGTTTCCTTATCTGGATTTGTCTGCTCTCTTATCCCAAGTTGTCTCTCACTTTGGTGCTAACCGTGTAATGTGGGGCAGTGATTTTCCATTTGTTGTTGCTGAATGTGGTTACAAAGGAGCCAAAGAAGCAGTGCATCATATTGCCAATGAGATCTCTTTGCCTTTATCAGATTTAGAGTGGATCATGGGAAAGACAGCTACACAACTCTTCCAAAACCAATTGACTCCACTCAAGAACTGA 1200 0.4142 MALRLSTVVSGFGPRHSSKPRLKLRFGIRSGCCATVTNMAFTETPSTSKVIDSHLHVWASPQEAGRFPYFPGQEPTLQGNADFLLQCMEEAGVDGALIVQPINHKFDHSYVTSIDVFSNAGIAKERKIGEKKGRNSDNTIMAMLDKIRHSGYYIVPLLSFCSLNSVLKKYPTKFVGCCLANPADDGSGLKQFEDLVLKDGYRAVRFNPYLWPTGEKACKLISLTYLLMTNKVGKAIFQRAGELNVAVGFMCMKGLGLHISEIEKLCTEFPSTVVLLDHLAFCKPPINDEEALVFSQLLNLSRFPQVHVKFSALFRVSRGQFPYLDLSALLSQVVSHFGANRVMWGSDFPFVVAECGYKGAKEAVHHIANEISLPLSDLEWIMGKTATQLFQNQLTPLKN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01195 399 PANTHER 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE 48 112 IPR032465 GO:0016831
Vimu6g01195 399 Pfam Amidohydrolase 51 390 IPR006680 GO:0016787
Vimu6g01195 399 SUPERFAMILY Metallo-dependent hydrolases 163 390 IPR032466 -
Vimu6g01195 399 Gene3D - 139 392 - -
Vimu6g01195 399 SUPERFAMILY Metallo-dependent hydrolases 50 112 IPR032466 -
Vimu6g01195 399 Gene3D - 37 116 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01195 - - pvu:PHAVU_008G016700g 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01195 6 12178210 12181609 Vimu6g01195 6 12178210 12181609 ECH