Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01193 ATGGCCACCTCGCTCTATTCAACTCATTGTCGTTCACTCGCCACCTCCTCCTCTTCCTCCGCCTCCTTCCAGCCCTCTCCCTTCTCGTCTAACCTCGCTTACCTTCAACGCGTCACCTTCTCGCATCGCTTTCTCGCTTCTAAGGTCTCTCTCAAGTCTCAACCCCCGTCGTATAAGATTCCGGTCCACACCCAGCAACAGGAAGGTGCAGTAGCTGCTTCCGTGACACCTGTTGAAAATGGCACTTCTCACAAGCAGCTGAATGCTGAATTATTGTCTGTTAAGTCCCCAAAGGAGTATGTAGTTGAAGACGGTTTTGAAAAGGACGAAAATGAGTCCACTGTTAGTATTACTGTTGTTGGAGCGTCTGGAGACCTTGCTAAGAAGAAGATATTTCCAGCTCTCTTTGCACTTTACTATGAGGATTGTCTCCCTAAGCACTTCACCATCTTTGGTTATGCACGGAGTAAGATGACTGATGCAGAACTGAGAAATATGGTTAGCAGGACTCTCACTTGTAGAATTGATAAGAGAGAGAACTGCAATGAGAAGATGGAGCAATTCCTAAAAAGATGTTTCTATCATTCTGGTCAATATGATTCTCAGGAAAACTTTGCAGTGCTAGACAAGAAGCTGAAGGAACAAGAGGGTGGGAGAACTTCTAATCGCCTGTTTTATCTTTCAATTCCTCCTAATATATTTATAGATGCTGTAAAATGTGCAAGCTTGTCGGCTTCTTCTGGTAATGGTTGGACCAGGGTCATTGTTGAAAAGCCTTTTGGTCGTGATTCTGAATCTTCAGCTGCATTAACAAAATCACTCAAGCAGTATCTGACTGAGGATCAAATTTTCAGGATTGACCACTATCTTGGGAAAGAGCTTGTGGAAAATCTTTCTGTCCTCCGATTCTCAAATCTCATATTTGAGCCATTATGGTCAAGGCAGTATATAAGAAATGTACAGTTGATATTCTCAGAAGATTTTGGGACTGAAGGACGTGGCGGGTATTTTGACCATTATGGTATCATAAGAGACATTATGCAGAATCATTTACTTCAAATACTAGCTCTCTTTGCAATGGAAACTCCTGTTAGTTTGGATGCAGAGGATATAAGAAATGAAAAGGTCAAAGTTCTTCGTTCAATGAGACCCCTGCAACTTGAGGATGTGGTTATAGGCCAGTATAAGAGCCACACAAGAGGAGGTGTTACATATCCAGCCTATGTTGATGACAAAACTGTACCAGTAGGCAGCTTAACTCCGACATTTGCTGCGGCTGCCCTCTTTATAGATAATGCAAGATGGGACGGGGTACCTTTTCTGATGAAGGCAGGGAAAGCATTACACAGCAAAGGAGCTGAGATACGGGTACAGTTCAGGCATGTGCCGGGTAATCTGTACAATCGAAATTTTGGTGCAGATCTTGATCGGGCGACCAATGAACTTGTTATCAGAGTTCAGCCTGATGAGGCTATTTATTTGAAGATAAACAACAAAGTTCCAGGTCTGGGAATGAAGTTGGACCGCAGTAATCTAAATCTTCACTATGCAGCAAGATATTCAAAGGAGATTCCAGATGCTTATGAGAGGCTACTGTTGGATGCCATTGAAGGAGAAAGAAGACTCTTCATACGCAGTGATGAACTGGATGCGGCTTGGTCACTCTTTACACCTGTGCTGAAGGAACTAGAAGAGAAGAAGATAATTCCAGAATACTATCCTTATGGTAGTAGGGGTCCTGTTGGTGCTCACTATCTTGCAGCCAGATACAACGTACGGTGGGGTGACCTTGGTTCAGACATTGACCGCTAA 1812 0.4349 MATSLYSTHCRSLATSSSSSASFQPSPFSSNLAYLQRVTFSHRFLASKVSLKSQPPSYKIPVHTQQQEGAVAASVTPVENGTSHKQLNAELLSVKSPKEYVVEDGFEKDENESTVSITVVGASGDLAKKKIFPALFALYYEDCLPKHFTIFGYARSKMTDAELRNMVSRTLTCRIDKRENCNEKMEQFLKRCFYHSGQYDSQENFAVLDKKLKEQEGGRTSNRLFYLSIPPNIFIDAVKCASLSASSGNGWTRVIVEKPFGRDSESSAALTKSLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDHYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPLQLEDVVIGQYKSHTRGGVTYPAYVDDKTVPVGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHSKGAEIRVQFRHVPGNLYNRNFGADLDRATNELVIRVQPDEAIYLKINNKVPGLGMKLDRSNLNLHYAARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPVLKELEEKKIIPEYYPYGSRGPVGAHYLAARYNVRWGDLGSDIDR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01193 603 PRINTS Glucose-6-phosphate dehydrogenase signature 434 460 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu6g01193 603 PRINTS Glucose-6-phosphate dehydrogenase signature 347 363 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu6g01193 603 PRINTS Glucose-6-phosphate dehydrogenase signature 253 266 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu6g01193 603 PRINTS Glucose-6-phosphate dehydrogenase signature 277 305 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu6g01193 603 PRINTS Glucose-6-phosphate dehydrogenase signature 329 346 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu6g01193 603 FunFam Glucose-6-phosphate 1-dehydrogenase 111 285 - -
Vimu6g01193 603 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 113 300 IPR036291 -
Vimu6g01193 603 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 105 594 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu6g01193 603 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 287 293 IPR019796 GO:0004345|GO:0006006
Vimu6g01193 603 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 114 596 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu6g01193 603 Gene3D - 111 285 - -
Vimu6g01193 603 Gene3D Dihydrodipicolinate Reductase; domain 2 286 595 - -
Vimu6g01193 603 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 300 594 IPR022675 GO:0004345|GO:0006006|GO:0050661
Vimu6g01193 603 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 119 297 IPR022674 GO:0006006|GO:0016614|GO:0050661
Vimu6g01193 603 NCBIfam glucose-6-phosphate dehydrogenase 115 595 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vimu6g01193 603 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 287 594 - -
Vimu6g01193 603 FunFam Glucose-6-phosphate 1-dehydrogenase 286 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01193 Vimu-Chr6 12158234 12163829 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01193 K00036 - gmx:100793694 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01193 6 12158234 12163829 Vimu6g01193 6 12158234 12163829 ECH