Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01188 ATGATAGATGGTGACATAAACTTTGGACAAGAGCTACTCTTCAATATTTTTGTCATAGATATTACTGAGTGGTCTGGTGGGTTGTATGTGTCTCCAACCATAGCTGGAAGTAGGCCTGGAAGTCTGATTGCGGGTGCGTGGGCAGCAATGATTTCTCTAGGGAAAGAAGGTTACTTGAAAAATACAAAAGCAATTATGGAAGCGTCAGTAAGAATACAGAAAGGCATAGAGGAGATTGCTGAGTTGTTTATTGTTGGAAACCCTGACATGACAATCGTGGCTTTTGGTTCAGATGTTCTGGATATATTTGAAGTCAATGATGTTATTTCATCCAAAGGGTGGCATTTGAATGCATTACAGAGACCCAACAGCATCCATATATGTGTTACACTACAACATGTGCCAATTGTTGAAGACTTTCTGAATGATTTGAAGGAATCTGTGAAAACTGTGAAAGCAAATCCAGGTCCAATAAGTGGAGGTCTGGCACCTATATATGGCGCCGCAGGGAAGATGCCAGATAGAGGCATGGTCCAGGAATTGCTGGTAGATTATATGGACGGTACCTGCTAA 573 0.4154 MIDGDINFGQELLFNIFVIDITEWSGGLYVSPTIAGSRPGSLIAGAWAAMISLGKEGYLKNTKAIMEASVRIQKGIEEIAELFIVGNPDMTIVAFGSDVLDIFEVNDVISSKGWHLNALQRPNSIHICVTLQHVPIVEDFLNDLKESVKTVKANPGPISGGLAPIYGAAGKMPDRGMVQELLVDYMDGTC 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01188 190 Gene3D Aspartate Aminotransferase, domain 1 34 151 IPR015422 GO:0003824
Vimu6g01188 190 Gene3D - 152 189 - -
Vimu6g01188 190 PANTHER - 20 190 - -
Vimu6g01188 190 FunFam Sphingosine-1-phosphate lyase 1 41 153 - -
Vimu6g01188 190 FunFam Sphingosine-1-phosphate lyase 1 151 189 - -
Vimu6g01188 190 SUPERFAMILY PLP-dependent transferases 22 154 IPR015424 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01188 10 188 Calmodulin-binding Proteins AT1G65960 26.562 8.55e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01188 K01634 - gmx:100794395 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01188 6 12129635 12131015 Vimu6g01188 6 12129635 12131015 ECH