Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01177 ATGGCTCTCCCACTCGGCAAGCTCACCATTCTCATCGGTGCAGGTATTGTTGGTTCAGTAATTGCAAAGGAAGGCAGTCTGCCTGATGTTTCTGGTCTCGTCTCCGGTGCTTTCAAGGTTGTTTTGAAGCAATTTAAAAGCAGTGATCCTGCTCCAGCTGTTAAAAAGCTGCCTCATAATGATGCTTTGATGGCTCAGGTAAACAGTCTCCGTCAGGAACTACAGCTTCTTGCTAGAGATAGATCAATCACTATTGTAAATTCAAGTGGGACAGGTGCTGTGTTATTTTCTGACTTGTTTGAGAAATGCACAGGTGGAAAAAAATATGTAACAGTGATTGTTATTGTTGTGGTGGGATATGGATACGTTTGGTGGAAGGGATGGAAGCTTCCTGATTTGATGTTTGCAACTAAACGTAGTTTGTCTGATGCTTGCACATCTATTGGTAATCAGATGGGGAAGCTGTATGGAACCATTGATGATGTAAAGAAGAAATTATCTTCAAGAATGAACCGTTTAGATGAAAGTTTAGACGAATGTGCTGCCCTTACTGAAAGCACCAGGGAGGAGATATCTGTAACTCAACAGAAGGCAGATACGATAAGTGGAAATTTCAAGTCTGTTCATGTTGCAGTCCGTGTTCTGGAATCTAGAATTAAAGAAATAGAAGAGAAACAGCCATCATCATCCAGTTCTTCCAGGCCAGTCATTGAGCTACCACCCGTTTCACCCTCTTCGAGGGTAAGCATTTTTCCCCACTTTGATTTTATGAGTGCAATATGGCTTTGGGTGAACTGTTCTTGTCAATTAGACATGCTGCCCCCTTACCCCCTCCCGAAGACTTTCGCTTGTCCACTTCCTTTGAAATTGTTCCTATGCTTACTCCTAGTCTGTATTATACAGGGTTCACAGTCGGGTTCGTCTATGCTGTCACTTGAGCTACCTTCTGTTACGCCATCAGCAAAGGATGGATCGCCATCAACAATATCGACTGATCAACCATCTCCATCGAATTCTGGTGGATCTGTCCAGGAGAGTAGAAGCAATGGATCTAGTTCTGGCTTGTTTGGGCTGGGTAGTAGGTTATCTGGCGTCTATGCTCCATTTCTGAGCAGAACTCGGAGTGCCACAGATTCAGTAGTCCAACAAACTCGTTCGACTAGTTAG 1167 0.437 MALPLGKLTILIGAGIVGSVIAKEGSLPDVSGLVSGAFKVVLKQFKSSDPAPAVKKLPHNDALMAQVNSLRQELQLLARDRSITIVNSSGTGAVLFSDLFEKCTGGKKYVTVIVIVVVGYGYVWWKGWKLPDLMFATKRSLSDACTSIGNQMGKLYGTIDDVKKKLSSRMNRLDESLDECAALTESTREEISVTQQKADTISGNFKSVHVAVRVLESRIKEIEEKQPSSSSSSRPVIELPPVSPSSRVSIFPHFDFMSAIWLWVNCSCQLDMLPPYPLPKTFACPLPLKLFLCLLLVCIIQGSQSGSSMLSLELPSVTPSAKDGSPSTISTDQPSPSNSGGSVQESRSNGSSSGLFGLGSRLSGVYAPFLSRTRSATDSVVQQTRSTS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01177 388 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF1664)-RELATED 1 226 - -
Vimu6g01177 388 MobiDBLite consensus disorder prediction 223 242 - -
Vimu6g01177 388 Pfam Protein of unknown function (DUF1664) 107 226 IPR012458 -
Vimu6g01177 388 Coils Coil 60 80 - -
Vimu6g01177 388 MobiDBLite consensus disorder prediction 315 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01177 Vimu-Chr6 12066888 12073147 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01177 - - ccaj:109792990 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01177 6 12066888 12073147 Vimu6g01177 6 12066888 12073147 ECH