Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00859 ATGGATCCTTTTGCGGAATATTTTTTGAAATTTCTCTCTTGGCTTTTGAATGCTCTGTTTTGGGTCTTCACCAAAGTCTTCATGAGATTATGTTGTTCTGATTCTTCTAGAGCAATGAAACCGCTTTATTCTTCTCAGTTTTCATGTGACAATGAGCAAGCTGAGTCAATTCATTCTGAGTCTGAAAATTTTGAGTATATGGCTGATGCTCTCTCACGTGAAAATGATCCAAATTATTCCGATGGTTGCCAGGGAGGAACAAAGTCCATTGAAAAACGTTGTTCTGAAACTCTTCGTGGCAGTGAGAATTTAGGGTCCGAAGAAGATGAAACGACAAAGTTGGTTTTCAAATTTGAATACCAAAAGTGGAATTACAATTACGATGAAGAATTCAGAGGAGGGTATGATGAAAGTAGTGATTTTGTGAAGGGGGGTGATGCTGTTTCTGCCAGCACCACCAATAAGTATGAGTTCATGTCAGGCAAGAGTTTCAGTCACTTCTTGGATGAACCTCAGGCTGGAAATTTCACTGTCAAAGAATGTTTTGTTCATTCAAACGAAGCCTTTAAATTGGAAAATCAAGTTAAATATGATTTTGGGTTATTGTTAAGGAAGAATTTTATGCCAGAAAATTGTGAAGAAGGGGTTAGTGAAGAAAATCTCGACAATTTCACAGAAAAGAAACTCAAAGCTGAGGAGTCTATAGAGCATCCTGTGGAGCCCATTGTTCGCAATTTTCTTTCAGAAGATGAATCTATTTGTTCAAGTTCCAACTCAGATTATATTATCAGTTCTTTGGGGGAAGGGTTTTTATCGGACACAGATTTTGGAAACACTTTGGAGTTTGAGACACTGGAGAGCAATGCAGAAGAAAATGCAGTTTTGACAGAAGACGATATGGACTTAGGGGATGAAAAAAGATATGAGAATTTGGATGTTGGATATGAGCCTGATGATTTCACCGAAGAGGATGAAGATGTAATGGATGAGCTTGGAAAGTTGGAAGAAGAATGCAGGCTAGAGGAGTCTTCAGGAAAAAGTTTTGAAGATAAAAATATCAATTCCAAGTTTCAACAATCAATGAAGCCCCATTCACAAACTTTAACAACTATTGATCTTGAGGATTCCAACCGGTTTGACACACTGTGGGAACATCAAGATTTGATAGAACAATTGAAGATGGAACTGAAGAAGGTCAGGGCCACTGGTCTGCCAACCATCCTTGAGGATTCTGAGTCTCCAAGGATAATGGAAGACTTGAAGCCATGGAAAATTGATGAAAAATTACAGCATGGTAACACCACAAACGAGCTTCCAAAATTCTACAGGAGTTATAGAGAACGAATGCGGAAATTCGACATCTTGAATTACCAAAAGATGTATGCTATAGGTGTTTTGCAGTCAAAGGACCCACTCCAATCATTTTCAACCCGTAAAAACCCTTCACCAGCATTCACAAACATTATTCCACGTGGCTTTCGCCTTTCTAGACGAAAACAAATAGAAGCTGACCCAATGAAGAAGTTCGTAAGTGAATTATACAGTGACTTGGAAATGGTTTATGTGGGGCAATTGTGCCTTTCTTGGGAATTCCTTCAGTGGGAATATGAGAAGGCCTTGAAGCTATGGGAATCTGACCAATACGGGTTACTAAGATTCAACGAAGTAGCAGGAGAGTTTCAACAATTCCAAGTGCTTCTCCAAAGGTTTATAGAGAATGAACCTTTCCTCCATGGTTCACGAGTTCAAAACTATGCCAGGAATCGTTGTGCAATGCGCAACCTTCTTCAAGTTCCAGTAATAAGAGAAGACAACGCCAGGGATAAAAGGAAATTCAGTAAAAGAGAAGCAGATAAAGATGCAATCACTAGTGACATGCTAGTGGAAATTTTGGAAGAATCCATCAGAACAATTTGGCGTTTTATAAGAGCTGATAAAGATGCATCTAGCTTGGCTCTAAAAGGTCTAAAAGAAAATCAAGTACAGCTCCAAGACCCTTCAAATTCAGAGCTTTTGCTGGAGATTAGAACAGATCTTCAAAAGAAAGAGAAGAGATTGAGAGAGGTTTTGAGGAGTGGAAGCTGCATTCTGAAGAAGTTCCAAAAGCATCATGAAGATGAGGCAGATCAAGTGCTTTACTTTTTCTCTCAAGTGGACATGAAATTGGTTTTGAGAGTGTTGAACATGTCAAGGATAACGACAGATCAACTAGCATGGTGTCATAGTAAATTAAACAAGATCACTTTTATAAACCGAAGGATACGTGTAGAACCATCATTTTTACTTTTCCCTACTTAA 2298 0.3864 MDPFAEYFLKFLSWLLNALFWVFTKVFMRLCCSDSSRAMKPLYSSQFSCDNEQAESIHSESENFEYMADALSRENDPNYSDGCQGGTKSIEKRCSETLRGSENLGSEEDETTKLVFKFEYQKWNYNYDEEFRGGYDESSDFVKGGDAVSASTTNKYEFMSGKSFSHFLDEPQAGNFTVKECFVHSNEAFKLENQVKYDFGLLLRKNFMPENCEEGVSEENLDNFTEKKLKAEESIEHPVEPIVRNFLSEDESICSSSNSDYIISSLGEGFLSDTDFGNTLEFETLESNAEENAVLTEDDMDLGDEKRYENLDVGYEPDDFTEEDEDVMDELGKLEEECRLEESSGKSFEDKNINSKFQQSMKPHSQTLTTIDLEDSNRFDTLWEHQDLIEQLKMELKKVRATGLPTILEDSESPRIMEDLKPWKIDEKLQHGNTTNELPKFYRSYRERMRKFDILNYQKMYAIGVLQSKDPLQSFSTRKNPSPAFTNIIPRGFRLSRRKQIEADPMKKFVSELYSDLEMVYVGQLCLSWEFLQWEYEKALKLWESDQYGLLRFNEVAGEFQQFQVLLQRFIENEPFLHGSRVQNYARNRCAMRNLLQVPVIREDNARDKRKFSKREADKDAITSDMLVEILEESIRTIWRFIRADKDASSLALKGLKENQVQLQDPSNSELLLEIRTDLQKKEKRLREVLRSGSCILKKFQKHHEDEADQVLYFFSQVDMKLVLRVLNMSRITTDQLAWCHSKLNKITFINRRIRVEPSFLLFPT 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00859 765 Coils Coil 382 402 - -
Vimu6g00859 765 Pfam Protein of unknown function (DUF1666) 515 764 IPR012870 -
Vimu6g00859 765 PANTHER OS09G0413600 PROTEIN 10 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00859 Vimu-Chr6 9454243 9457628 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00859 - - gmx:100785051 1199.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00859 6 9454243 9457628 Vimu6g00859 6 9454243 9457628 ECH