Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00842 ATGGATGACCCTATAGGTTCAATCATGCCACTACCATGCAACATGCATCTGTATCTTTGTCTGATGTTATTATATATCCATTTTGTAGTGGTCTTTGCAGCAAACTCTGATGTAGCAAGACACCAATCACAAGACTGGTTAAACCATGGTGGAGATTTGTTCAACCGAAGACATGCTTCCAAGGAGCGTAAGATCAGTCCCAAAACTGCACCGGACCTACGTATGAAGTGGAAATTCTATGCTGGCAGAGACATCACTGCAACACCAGCCATATATGATGGTATCCTTTATTTTCCAAGCTGGAATGGTAACATCTATGCAGTTAAAGAAGCTGATGGATCGCTTGTTTGGAAGCAGAACTTGGACAAATTGACAGGTCTGAAAGCACCCGAAGGCCTTGTTAATAACGTAAATTGGACAGTGTCACGCTCAACTCCTACAGTGGCCGGTGATTTAATGATTTTTGCAATGTATGGTCCTGCTGCTGTTATTGCTGTCAAAAGAGCAACAGGTAAGCTTGTGTGGAAGACCATATTGGATCCCCATCCTAAAGCACTCGTCACCATGTCAGGAACATATTACAAAAGAGGTTACTACGTTGGATCATCTTCCTTGGAATCACTTGTAACCCTTGATAAGTGCTGCACGTTTCGTGGAAGTTTTGCAAAACTTGATTCTGAATCCGGTGACATCTTGTGGAGGACCTATATGATACCAGATAACAATAACAGAAAAGGAGGATATGCAGGAGCAGCCGTTTGGGGAAGTAGTCCTTCCATTGATGAGAAAAGAAACCATGTCTATATTGGCACAGGAAGCCTATATGCTGCTCCATTACGGATACGCCAGTGTCGAGAGAGACAAATTAATAGAACTCAGCGTACTCAACCAGATGAGTGTGTTGAACCAGACAACCACTCGGACTCAATCTTAGCCCTTGATTTGGATGATGGGAAGATCAAATGGTACCAGCAGTGTGGAGGCTACGATGTGTCAATCTTAGTATGTAGCGCTTCTCCCACACCTGGTCCTGATTGTCCTCCTCAAGCAGACGAACCAGATGTTGATTTTGGTGAGGCACCTATGATGTTGACAGTATATATAAATCGGATCAAGAGAGATATTGTTGCTGCAGTCCAGAAAAGTGGAATTGCATGGGCCTTTGATCGCAATGATGGTCACCTCGTCTGGCATACGGAAGCTGGGCCATATGGGTTGGCAGGAGGTGGATCATGGGGTGCAGCAACTGATGAAAAGAGGGTTTACACAAACATTGTGAATTCTGATGCCCAAAATTTCACGCTCAGACCCTCAAATAAGATTACAACTGCGGGTGGGTGGGTGGCAATGGAGGCTAACAATGGTAGAGTTCTGTGGTCAACAGCAAACCCAGCTAACAGCACTGCTTATGGCCCTGTCAGTGTTGCAAATGGTGTTGTCTTTGGTGGATCCGCTGATAGAATGGGATACATATATGCAATTGATGGAAAGAGTGGGAAAATTTTATGGTGGTATAAAACTGGAGCTAGTGTCTATGGAGGCATGTCAATCAACAAAGGTTGCATCTATGTCGGCCATGGATACAATGCTGCTTATGGCTATACCTTGAACTTAACAGAGGGAAAGTTTCTCTTTGCTTTCTGTGTCTAA 1650 0.4406 MDDPIGSIMPLPCNMHLYLCLMLLYIHFVVVFAANSDVARHQSQDWLNHGGDLFNRRHASKERKISPKTAPDLRMKWKFYAGRDITATPAIYDGILYFPSWNGNIYAVKEADGSLVWKQNLDKLTGLKAPEGLVNNVNWTVSRSTPTVAGDLMIFAMYGPAAVIAVKRATGKLVWKTILDPHPKALVTMSGTYYKRGYYVGSSSLESLVTLDKCCTFRGSFAKLDSESGDILWRTYMIPDNNNRKGGYAGAAVWGSSPSIDEKRNHVYIGTGSLYAAPLRIRQCRERQINRTQRTQPDECVEPDNHSDSILALDLDDGKIKWYQQCGGYDVSILVCSASPTPGPDCPPQADEPDVDFGEAPMMLTVYINRIKRDIVAAVQKSGIAWAFDRNDGHLVWHTEAGPYGLAGGGSWGAATDEKRVYTNIVNSDAQNFTLRPSNKITTAGGWVAMEANNGRVLWSTANPANSTAYGPVSVANGVVFGGSADRMGYIYAIDGKSGKILWWYKTGASVYGGMSINKGCIYVGHGYNAAYGYTLNLTEGKFLFAFCV 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00842 549 Gene3D - 31 517 - -
Vimu6g00842 549 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 42 514 IPR011047 -
Vimu6g00842 549 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 19 549 - -
Vimu6g00842 549 SMART ire1_9 146 178 IPR018391 -
Vimu6g00842 549 SMART ire1_9 89 120 IPR018391 -
Vimu6g00842 549 SMART ire1_9 258 325 IPR018391 -
Vimu6g00842 549 SMART ire1_9 472 506 IPR018391 -
Vimu6g00842 549 Pfam PQQ-like domain 85 322 IPR002372 -
Vimu6g00842 549 Pfam PQQ-like domain 446 540 IPR002372 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00842 Vimu-Chr6 9310606 9314174 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00842 - - gmx:102668917 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00842 6 9310606 9314174 Vimu6g00842 6 9310606 9314174 ECH