Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00825 ATGGGAAGTTTCGTTTCTTCGCTCTTTGGTGGTAGCGGCGGCGATGAGACATCGTACTCGGAGGGGCCTTCTCGCGTGCTGTCGTTCCACTCGTCGGCGCGTTGGCAGCTCCACTTCAACGAGGTCAAAGAATCCGGCCAGCTCCTCGTGGTAGATTTCTCGGCGTCGTGGTGCGGACCTTGCAAATTCATAGAGCCAGCGATTCACGCCATGGCCGGAAAGTTCACTGACGTTAACTTCGTCAAGATTGACGTCGACGAATTATCGGATGTGGCGGGGGAGTTTCAGGTGCAGGCGATGCCGACGTTCGTGTTGTTCAAGGGAGGGAAGATAATTGACAGGGTTGTTGGCGCAAAGAAGGACGAGCTCGAGAAGAAGGTTGAGAAGCATCGAGCTCTTCAAGCCTAG 408 0.549 MGSFVSSLFGGSGGDETSYSEGPSRVLSFHSSARWQLHFNEVKESGQLLVVDFSASWCGPCKFIEPAIHAMAGKFTDVNFVKIDVDELSDVAGEFQVQAMPTFVLFKGGKIIDRVVGAKKDELEKKVEKHRALQA 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00825 135 ProSiteProfiles Thioredoxin domain profile. 16 132 IPR013766 -
Vimu6g00825 135 Pfam Thioredoxin 39 128 IPR013766 -
Vimu6g00825 135 Gene3D Glutaredoxin 12 133 - -
Vimu6g00825 135 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Vimu6g00825 135 PRINTS Thioredoxin family signature 49 57 - -
Vimu6g00825 135 PRINTS Thioredoxin family signature 96 107 - -
Vimu6g00825 135 PRINTS Thioredoxin family signature 57 66 - -
Vimu6g00825 135 CDD TRX_family 38 128 - -
Vimu6g00825 135 FunFam Thioredoxin 25 132 - -
Vimu6g00825 135 PANTHER THIOREDOXIN 26 129 - -
Vimu6g00825 135 SUPERFAMILY Thioredoxin-like 38 130 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00825 Vimu-Chr6 9177794 9178416 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00825 K03671 - qsa:O6P43_009051 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00825 6 9177794 9178416 Vimu6g00825 6 9177794 9178416 ECH