Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00814 ATGGCAACCTCGTCAAGTTTTGTTCCTATTGTACTTCTAGGTTTAGTTTTAGTCCTAGGAGTAACTGTCCCTAAAAGTGAAGCCAGGCCAAGAGCATTCTTTGTATTCGGAGATTCTCTAGTTGACAATGGAAACAACAACTATTTGCAAACCGTTGCTCGTGCCAATGCCCCTCCTTATGGAATTGACTACCCAACTCACAAACCAACCGGACGCTTCTCTAATGGATTCAACATTCCTGATTTTATCAGTCAAGAACTTGGTGCTGAGTCTACAATGCCATACTCGAGCCCTGATTTAACAAGAGAGAATCTATTAGTTGGTGCGAATTTTGCTTCAGCTGGAGTTGGAATCCTTAACGATACAGGAGATCACTTTGTAAGTACTTGA 390 0.4179 MATSSSFVPIVLLGLVLVLGVTVPKSEARPRAFFVFGDSLVDNGNNNYLQTVARANAPPYGIDYPTHKPTGRFSNGFNIPDFISQELGAESTMPYSSPDLTRENLLVGANFASAGVGILNDTGDHFVST 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00814 129 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 31 125 - -
Vimu6g00814 129 Pfam GDSL-like Lipase/Acylhydrolase 34 120 IPR001087 GO:0016788
Vimu6g00814 129 Gene3D SGNH hydrolase 23 129 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00814 Vimu-Chr6 9070167 9070803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00814 32 123 Acyl Lipid Metabolism Gene Families AT4G10950 48.913 1.11e-21 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00814 - - gmx:100795251 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00814 6 9070167 9070803 Vimu6g00814 6 9070167 9070803 ECH