Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00774 ATGGGTTGCACGGCGTCCAAGCTAGAAAACGAGGACACCGTGCGTCGTTGCAAGGACCGCCGCCGTCTCATGAAGGATGCCGTCTACGCGCGCCACCAACTCGCTGCCGCCCACTCCGACTACTGCCGTTCCCTCCGCCTAACCGGCTCCGCCCTCTCCACCTTCGCCGCCGGCGAACCCCTCTCCGTCTCTGACCACACCCCCGCCGTCTTCCTCAACAACTCCCAACAACCACCCCCTCCCATCCACCACACTCGCCCACCCTCACCACCTCGCCACCACCCCCACCACCCCCACCACTCTCCACCACCCTTCAACCCTTCCCCGCCGCCGAAACTCGCCCCCATCCAACCCCGCCGCCGCAAGCCGCCGCCTCCAAAGCTGCCCCATATTCTCTCCGACTCGAGCCCCTCCTCCACGCCGCGAAGCCAAGCGTCGAATTTTCCTTCGAACTTTTTCCCCACTGCGCATTCAACATACTCATCCACCCCTTCCCAAACCTCCTCTGTTTGGAACTGGGAAAATTTCTACCCCCCTCCACCTCCTCCCGCTTCCGATTACTTCCCCGAAGAACACCAACATCAACACCAACATCAACACCAACACCAACACCAACAAAAACTCTCGCAGGAGGCTCAGGCTCAAACACAAACGCAAACACCTTCCCTTCACTCTCATAAAACACAAACAGCCTCTCATTACTCCCACAAAACCCAACCCACCAATCCTCAAATTCATGACTCCGACTCCGAGAGATCTGAATACGATTACTTCGATGGAAAACACGAGACTCAAAAAACTTACTCCCACTCTCGCTCTCCCTCTCACATTCACTCTGATTCTCACTCTCATCACCATCTTCCTGAAGAGTATACCGAGACTGAGAGGGAAGAGGTTCAGTGCAGTGAGTGGGGGGATCATTACAGCACCACGAGTTCATCCGATGACGATGATGATGGGGTGGAGGAGGATGTGGAGTCGCGGTCCGAGATCGGGACCCGGTCGAATTTCGGGTCGTCCATGCGGGCCGAGTCCGTTGCGGCTGGCGGCGGCGCTAAGGGGTTCGACGCCGCGTCCTCCGTCGCGGAGATGAAGATGGTGGTGAGGCACAGGGACTTGAGGGAGATCGTGGAAGCTATTAAAGAGAATTTTGATAATGCTGCTTCCGCCGGAGATCAGGTTTCGGAGATGCTCGAGATCAGTAAGGCTCAGCTCGATCGCAGCTTCAAACAATTGAGGAAGACTGTGTATCACTCGAGCAGCATATTGAGCAATCTGAGCTCAAGTTGGACCTCAAAACCGCCACTGGCGGTTAAGTACCGGCTGGACACCGGTTCGCTGGATGAACCAGGCGGTTCAAAGAGTCTTTGCTCCACCATAGAACGGCTTTTGGCGTGGGAGAAAAAGCTGTACGAGGAGGTTAAGGCTAGAGAAGGTGTTAAGATCGAACATGAAAAGAAATTGTCAGCTCTGCAGACTCAGGAATACAAGGGAGAGGATGAAGCTAAGATATTCAAAACCAAGACTTCCATAAATAGGCTGCAGTCACTTATAGTTGTCACTTCTCAGGCTGTGTCTACCACCTCAACTGCCATTGTTGGCCTTAGGGACTCTGCTCTGGTCCCTCAGCTTGTTGCTCTCATTCATGGATTTATGTACATGTGGAAAGCAATGCATAATTACCATGAAATTCAAAGCAACATAGTGCAGCAAGTCCGTGGCCTTGTGAACAGATCTTCAAGAGGTGACTCCACTTCTGAACTGCACAGGCAGGCTACACGGGACCTGGAAGCAGCCGTGTCAGCCTGGCACTCCAGTTTTTGTCGCCTGATAAAATTTCAGCGGGAGTTCATCCACTCCTTGCATGGCTGGTTCAAGCTCAGTCTTCTTCCAGTGGACAATGATAACATCAACAACAGCAGGGACAACTCTGATACATACCACTTTTTTGATGAATGGAAACTCGCACTTGACCGTGTTCCAGACACAGTTGCATCTGAAGCCATAAAGAGCTTTATCAATGTTGTCCATGTGATATCTTCCAAGCAAACTGAAGAGCTGAAGATCAAGAAAAGAACCGAGACAGCATCAAAGGAACTTGAGAAAAAGGCTTCCTCTGTGAGAAACCTAGAGAGGAAGTTCTACAATTCATATTCTATGGTAGGAATTAGCCTTCCTGATACAGCAGCTGACAATGGACAGGGTCTGGATGCTCGCGATCCACTGGCGGAGAAAAAACTGGAACTGGCAACCTGCCAAAGGCGCGTTGAAGATGAAATGCTGAGGCATTCAAAAGCTGTGGAGGTAACAAGAGCCATGACCCTGAACAATTTGCAGACAGGGTTGCCTGGTGTGTTTCAGGCATTGACCAGTTTCTCTTCCTTATTCACGGAGGCTCTTGAATCAGTGTGTACTCGTTCTTATGCCATCAAGTAG 2436 0.5197 MGCTASKLENEDTVRRCKDRRRLMKDAVYARHQLAAAHSDYCRSLRLTGSALSTFAAGEPLSVSDHTPAVFLNNSQQPPPPIHHTRPPSPPRHHPHHPHHSPPPFNPSPPPKLAPIQPRRRKPPPPKLPHILSDSSPSSTPRSQASNFPSNFFPTAHSTYSSTPSQTSSVWNWENFYPPPPPPASDYFPEEHQHQHQHQHQHQHQQKLSQEAQAQTQTQTPSLHSHKTQTASHYSHKTQPTNPQIHDSDSERSEYDYFDGKHETQKTYSHSRSPSHIHSDSHSHHHLPEEYTETEREEVQCSEWGDHYSTTSSSDDDDDGVEEDVESRSEIGTRSNFGSSMRAESVAAGGGAKGFDAASSVAEMKMVVRHRDLREIVEAIKENFDNAASAGDQVSEMLEISKAQLDRSFKQLRKTVYHSSSILSNLSSSWTSKPPLAVKYRLDTGSLDEPGGSKSLCSTIERLLAWEKKLYEEVKAREGVKIEHEKKLSALQTQEYKGEDEAKIFKTKTSINRLQSLIVVTSQAVSTTSTAIVGLRDSALVPQLVALIHGFMYMWKAMHNYHEIQSNIVQQVRGLVNRSSRGDSTSELHRQATRDLEAAVSAWHSSFCRLIKFQREFIHSLHGWFKLSLLPVDNDNINNSRDNSDTYHFFDEWKLALDRVPDTVASEAIKSFINVVHVISSKQTEELKIKKRTETASKELEKKASSVRNLERKFYNSYSMVGISLPDTAADNGQGLDARDPLAEKKLELATCQRRVEDEMLRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALESVCTRSYAIK 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00774 811 MobiDBLite consensus disorder prediction 181 342 - -
Vimu6g00774 811 MobiDBLite consensus disorder prediction 101 122 - -
Vimu6g00774 811 MobiDBLite consensus disorder prediction 247 303 - -
Vimu6g00774 811 PANTHER UNCHARACTERIZED 1 204 - -
Vimu6g00774 811 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vimu6g00774 811 Coils Coil 693 713 - -
Vimu6g00774 811 MobiDBLite consensus disorder prediction 206 246 - -
Vimu6g00774 811 Pfam Protein of unknown function (DUF632) 373 677 IPR006867 -
Vimu6g00774 811 MobiDBLite consensus disorder prediction 69 150 - -
Vimu6g00774 811 MobiDBLite consensus disorder prediction 132 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00774 Vimu-Chr6 8786332 8791327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00774 1 97 Acyl Lipid Metabolism Gene Families AT2G27090 30.476 1.04e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00774 - - gmx:100815888 1236.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00774 6 8786332 8791327 Vimu6g00774 6 8786332 8791327 ECH
Vimu9g01704 9 26172810 26173583 Vimu6g00774 6 8786332 8791327 PCT