Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00763 ATGAGAACTCTTCACCACGCTCCAACCCTCCTTAGACCACACACCACAACCCAACTTCAATCAACCCAACCCGTACAAAAAATGGACAAAATGATGAACGCCAACATGCCTCAGTTACGATCATCGTCGTCAATGTCACCACCATTGACATCATTGACCAACAAAGTTGGAAAGAGATGGAAGGAATACCAAGGAATGAACAATTGGAACGGTTTGTTAGACCCCTTGGACGAGAACCTTCGCGCCGAGATTCTCCGCTATGGCCAATTTGTTGAGGCCGCTTATAAGTCCTTCGAATTCGACCCTTCTTCCCCTAATTACGCCACATGCAAGTTCCCAAAAAGCAAACACTTGGAAAGGTGCGGATTACACAACACCGGTTACAAGGTAACCAAGCACCTACGTGCAACCTCGGGGATCAAACTACCTACCTGGGTGGACAAAGCTCCGAGTTGGGTGGCAACACAATCAAGCTACATTGGGTACGTGGCAGTGTGTCACAACAAAGAGGAGATCAAACGACTGGGTCGAAGAGACATTGTTGTCGCATTCAGAGGTACCACCACATGTCTTGAGTGGCTCGAAAATCTTCGAGCCACTCTTAATAACGTGGTTCAATCTACCGCAAATGGGATTACGACGGCAGAGCCATGCGGTGTGGAAGAAAATGGAGCTATGGTGGAAAGTGGGTTTCTGAGTTTGTACACGTCAAAGCTGAGTGACAACCCTTCGTTTATGAGCTTGCAAGATATGGTGAGAAAAGAGATTGCTCGGATCCTTAAAACTTACGAAGGAGAAAACTTGAGTTTGACCATTACTGGGCATAGTTTGGGGGCGGCATTGGCGACCCTAACCGCGTATGATATAAGAAACAGTTTTCTTCGGCCACCGCATGTGACGGTGATCTCCTTCGGTGGCCCCCGCATCGGAAACCGGAGCTTTCGTCGGCGGCTGGAGGAGCAGGGGACTAAGGTGTTGCGGATAGTGAACTCGGATGATGTTATAACCAAGATACCGGGCTTTGTGTTTGATGAGGTGGAGAAAAAGGAAGGTGACGTGGAGGGAAATGGAGGTGAAGAGGTGGCTAGCTTTCAGAGATGGATGCGTAGGCGCGTGGAAGAGATACAGTGGCTGTTGTACTCGGAGATCGGGGAGGAGCTTCGGCTTTGTAGCAGGGATTCTCCGTACCTTAGAGGAATTAACATTGTAACTTGTCACGATTTGAACATCTATCTGCATCTTGTTGACGGCTTTGTCAGTTCTAAATGTCCCTTTAGAGCCACTGCTAAGAGGTTTCTCCGCCATTAA 1308 0.4839 MRTLHHAPTLLRPHTTTQLQSTQPVQKMDKMMNANMPQLRSSSSMSPPLTSLTNKVGKRWKEYQGMNNWNGLLDPLDENLRAEILRYGQFVEAAYKSFEFDPSSPNYATCKFPKSKHLERCGLHNTGYKVTKHLRATSGIKLPTWVDKAPSWVATQSSYIGYVAVCHNKEEIKRLGRRDIVVAFRGTTTCLEWLENLRATLNNVVQSTANGITTAEPCGVEENGAMVESGFLSLYTSKLSDNPSFMSLQDMVRKEIARILKTYEGENLSLTITGHSLGAALATLTAYDIRNSFLRPPHVTVISFGGPRIGNRSFRRRLEEQGTKVLRIVNSDDVITKIPGFVFDEVEKKEGDVEGNGGEEVASFQRWMRRRVEEIQWLLYSEIGEELRLCSRDSPYLRGINIVTCHDLNIYLHLVDGFVSSKCPFRATAKRFLRH 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00763 435 CDD Lipase_3 155 347 - -
Vimu6g00763 435 Gene3D alpha/beta hydrolase 59 434 IPR029058 -
Vimu6g00763 435 MobiDBLite consensus disorder prediction 1 23 - -
Vimu6g00763 435 Pfam Lipase (class 3) 181 341 IPR002921 GO:0006629
Vimu6g00763 435 SUPERFAMILY alpha/beta-Hydrolases 81 342 IPR029058 -
Vimu6g00763 435 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 27 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00763 Vimu-Chr6 8679053 8680360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00763 9 433 Acyl Lipid Metabolism Gene Families AT2G44810 61.176 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00763 K16818 - gmx:100816744 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00763 6 8679053 8680360 Vimu6g00763 6 8679053 8680360 ECH
Vimu9g01709 9 26222369 26222679 Vimu6g00763 6 8679053 8680360 PCT