Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00670 ATGCGTTTTTGCCCGTGCTTTGGATCCGACGAGGCCAAGGCTATCGCCGATCGCGACCCGGTTCTGCTGGTTTCGGGTATGGGTGGCTCCATTGTGAATTCCAAGCCCAAGACATTCGGGTTCACAACCCGGGTTTGGGTCAGGCTTCTGCTCGCTGATATGGAGTTCCGGAAGAAGATTTGGTCCCTTTACAATCCCAAAACAGGCTACTGTGAAACGTTGGACAAGAAGTCTAAGCTTGTGGTCCCTGACGATGATCATGGCCTCTATGCGATCGATATTTTGGATCCATCGTGGTTTACGAAGTGTGTGCATTTGACAGAGGTGTATCATTTTCACGACATGATTGACATGCTTGTTGGATGCGGTTACGAGAAGGGAACCACGCTGTTTGGGTTCGGATATGATTTCCGCCAAAGCAATAGGATTGACAAGTCAATGGAAGATCTTAAACATAAGTTGGAGACTGCTTACAAAGCTTCTGGTGGAAGAAAAGTCAATTTAATTTCTCATTCCATGGGAGGAATTATGATCTCGTGTTTCATGTCGCTTCACGGAGATGTCTTTACGAAATATGTGAATAAGTGGATTTGCTTGGCTTGCCCTTTTCAAGGTGATTCCTTTGCTGTTGCGTGTTTTCCTTTCTTTTGGCCCCTGTTCTTTTTGCTAGTGGAGTGTCCATCAGTCTATGAAATGTTGGCAAATCCATCTTATGAGTGGAAAAAGCAGCCAGAAATTCTAGTCTGGCGAAAGCATACAAAGGACGGGGACAATAACACCAATTTGGAATCTTATGGACCAACCCAGAGTATATCTTTATTTGAAGAAGCACTGCGGAATAATGAGCTAAGTTATAATGGGAAAACAATACGGCTTCCCTTTAACTTTGACATCCTTGACTGGGCTATTAAAACACGACAACTTATCGCAAATGCTAAATTGCCAGATGGAGTCAGCTTCTATAACATTTACGGGACATCGTTGGACACACCTTTTGATGTTTGTTATGGTTCGGAAGATTCTCCAATTGAGGACTTATCCGAAATTTGCCAGACAATGCCACTATATTCTTATGTGGATGGGGATGGAACAGTTCCTGCTGAATCTGCGAAGGCTGATGGACTGAAAGCCACTGAAAGGGTGGGAGTTGGTGCTTCTCATCGTGGAATATTACGAGATGAGACAGTATTCCAACATATTCAAAAATGGTTGGGTGTTGAGCCATTGGTTAGCAAGCAATCTAAAACATCCAAAGTTGCAGATGCTGATCGAATTGTGCCTATGGTTCTATAA 1293 0.4377 MRFCPCFGSDEAKAIADRDPVLLVSGMGGSIVNSKPKTFGFTTRVWVRLLLADMEFRKKIWSLYNPKTGYCETLDKKSKLVVPDDDHGLYAIDILDPSWFTKCVHLTEVYHFHDMIDMLVGCGYEKGTTLFGFGYDFRQSNRIDKSMEDLKHKLETAYKASGGRKVNLISHSMGGIMISCFMSLHGDVFTKYVNKWICLACPFQGDSFAVACFPFFWPLFFLLVECPSVYEMLANPSYEWKKQPEILVWRKHTKDGDNNTNLESYGPTQSISLFEEALRNNELSYNGKTIRLPFNFDILDWAIKTRQLIANAKLPDGVSFYNIYGTSLDTPFDVCYGSEDSPIEDLSEICQTMPLYSYVDGDGTVPAESAKADGLKATERVGVGASHRGILRDETVFQHIQKWLGVEPLVSKQSKTSKVADADRIVPMVL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00670 430 SUPERFAMILY alpha/beta-Hydrolases 17 392 IPR029058 -
Vimu6g00670 430 Pfam Lecithin:cholesterol acyltransferase 84 210 IPR003386 GO:0006629|GO:0008374
Vimu6g00670 430 Gene3D alpha/beta hydrolase 79 405 IPR029058 -
Vimu6g00670 430 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 15 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00670 Vimu-Chr6 7839226 7849028 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00670 4 422 Acyl Lipid Metabolism Gene Families AT3G03310 64.853 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00670 K22389 - gmx:100797043 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00670 6 7839226 7849028 Vimu6g00670 6 7839226 7849028 ECH