Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00667 ATGAGGTATAGGAAGCAAAATGGAGGTGCAAAAGAATTTCCTGGAGATAGAAGCCCAATGTGCAGGTGGAAGAGAAGAGTGGAGGATTGTGTTTTGGGTATCGTGATCCATCATCAACAAAACATAAGAAAGAAGAGAGAATCGAAAAGACGAGAAGAGGGTAGAGATTGCAGCAGATCCATGGCGGCGAGTAGGAGCACTTTACCATTGATCAAATACCTGAGAGTGCGCGTCGACGCTCTTCCCCGCAACTCTCCGTTAACCCTCGCTCCCACCGTCTTCCTTCGCCGTTTTTGTGAAGAGGTTCGTGGCAGTTTTCTCGACAAGTCCGAAGTCGCAGATCGCGTCATCTCCTGCGTCAAAAACTTCCAGAAAGTCGACCCAGCCAAGGTTACCCCGAATGCTCACTTCCAGAATGACCTTGGATTGGATAGTTTGGATGCCGTAGAGATTGTGATGGCTCTTGAGGAAGAGTTTGGGTTTGAGATTCCTGATAATGAGGCTGACAAGATCAACTCTATTAAACATGCTGTGGACTTCATTGCATCCCATCCTCAGGCAAAGTAG 567 0.4762 MRYRKQNGGAKEFPGDRSPMCRWKRRVEDCVLGIVIHHQQNIRKKRESKRREEGRDCSRSMAASRSTLPLIKYLRVRVDALPRNSPLTLAPTVFLRRFCEEVRGSFLDKSEVADRVISCVKNFQKVDPAKVTPNAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIKHAVDFIASHPQAK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00667 188 Hamap Acyl carrier protein [acpP]. 111 185 IPR003231 GO:0006633
Vimu6g00667 188 ProSitePatterns Phosphopantetheine attachment site. 140 155 IPR006162 -
Vimu6g00667 188 Pfam Phosphopantetheine attachment site 115 181 IPR009081 -
Vimu6g00667 188 NCBIfam acyl carrier protein 110 184 IPR003231 GO:0006633
Vimu6g00667 188 ProSiteProfiles Carrier protein (CP) domain profile. 110 185 IPR009081 -
Vimu6g00667 188 Gene3D - 100 187 IPR036736 -
Vimu6g00667 188 SUPERFAMILY ACP-like 108 184 IPR036736 -
Vimu6g00667 188 PANTHER ACYL CARRIER PROTEIN 68 186 IPR003231 GO:0006633
Vimu6g00667 188 MobiDBLite consensus disorder prediction 42 61 - -
Vimu6g00667 188 FunFam Acyl carrier protein 99 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00667 Vimu-Chr6 7810976 7812456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00667 70 188 Acyl Lipid Metabolism Gene Families AT1G65290 74.167 8.24e-59 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00667 K03955 - gmx:100305656 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00667 6 7810976 7812456 Vimu6g00667 6 7810976 7812456 ECH