Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00663 ATGGATGCTATACGGAAGCAGCTCGATGTGTTGATGGGAGCCAACCGTAACGGCGATGTCCGTGAAGTCAATCGCAAGTACTACGATCGCGACGTCTGTCGTCTCTACCTTGTCGGTCTCTGTCCTCACGAACTCTTCCAGTTAACGAAAATGGATATGGGACCTTGCCCTAAGGTGCACTCTCTTCAGCTCCGGAAAGAGTATCCTTCTCGATCTCTAGGGCTAGGTTTGCGGTGCCGGCGTCATTTAGATGCAGTGGCTTTCTTGTGTTTGTGTTACTGTTGTTACTTAACTGTTCTTAGATACGAGGAGGCGAAGGCGAAAGGGACTGATAATTATGACAGGGAATTGGAGGATGTCATAGATAAGCTTATTGGTGAGTGTGATAGGAAAATTGGCAGGGCTCTCAAGCGGCTTGAGGATGAGGATGCCAAGGCTGCCATTGCGATTTCGGTCTCCGAAGTTACTCAAACCCCTGAGGTGCTTGAGTTGTCTAAGCAAATTAAAGAGAAGTTGAAAGAAGCTGATCAATACGATCTTGAAGGCAAGACAGATCTTAAGATTCGAGCTTTAGAGGTCGTAGAGGAACTCAGAACTAAGAGAGCAGACAAGCAGTCCATGCTTCTTTTAGATGCCTTTAACAAAGACAGGGCATCTTTACCTACACCTCTACCAAATCCACCACCTTTGGCACCCCTACCCGTAGTTGCTCCTGATCCTCGAACACAAGAGATGATAAATGAAAAGCTGAAGAAGGCTGAGGATCTTGGTGAACAAGGAATGGTTGATGAGGCTCAAAAAGCATTGGAAGAGGCTGAAGCACTTAAGAAGCTTCCTGCCAGGCAGGAGCCAGTGTTGGATTCATCAAAGTATACAGCAGCAGATGTCCGGATTACCGATCAAAAGCTACGTGTGTGCGACATTTGTGGAGCTTTTTTGAGTGTTTATGACAGTAATACCTCCTTGTCACCAGCAGGCTCTTGTGCCAGTTTTACGAGGATAACTTTTGCAGCTAAAGAATGTGCTTTGATTTGTATTATTATTTACAGCGATCGCCGATTAGCTGATCATTTTGGAGGGAAACTTCATTTAGGGTATATGCAGATTCGTGAGAAGTTAGCAGAACTTCAAGAAGAAAGGAACAAAAGCCGAAAGACTGATCGGCACGAGGACAGGAGGTCAAAAGAACGGAGTAGGGATCGAGACAGGGAGTCAAGCAGGGACCGTGAACGTGGTGATAGTCGTGAACGAGGGCGAGACCATGATCGTAGGAGTAGAGACCGTGACAGGCATTATGATAGAGATCGTGGACATGAGCGAGACCGTGACAGAGACTCTGACCGCACTCGCTCCTATGAATCAAGAAGTCGTAGGAGGTCACGCTCTAGATCTCGAGAGCGATCTAGAGATTATGATCGACATAGGTACCAGGCTGCCTTGACTAATTCTTTTATTTTATATTCTGTCTGTTTAACTGTACGAAGCAACTGCTTTGGATCCCATATGAATGACACAAGTGGGCCCTTGATCTAA 1533 0.4625 MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVHSLQLRKEYPSRSLGLGLRCRRHLDAVAFLCLCYCCYLTVLRYEEAKAKGTDNYDRELEDVIDKLIGECDRKIGRALKRLEDEDAKAAIAISVSEVTQTPEVLELSKQIKEKLKEADQYDLEGKTDLKIRALEVVEELRTKRADKQSMLLLDAFNKDRASLPTPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSNTSLSPAGSCASFTRITFAAKECALICIIIYSDRRLADHFGGKLHLGYMQIREKLAELQEERNKSRKTDRHEDRRSKERSRDRDRESSRDRERGDSRERGRDHDRRSRDRDRHYDRDRGHERDRDRDSDRTRSYESRSRRRSRSRSRERSRDYDRHRYQAALTNSFILYSVCLTVRSNCFGSHMNDTSGPLI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00663 510 MobiDBLite consensus disorder prediction 378 454 - -
Vimu6g00663 510 Pfam LUC7 N_terminus 243 321 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vimu6g00663 510 Pfam LUC7 N_terminus 2 70 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vimu6g00663 510 Pfam LUC7 N_terminus 341 392 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vimu6g00663 510 Pfam LUC7 N_terminus 101 205 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vimu6g00663 510 Coils Coil 161 181 - -
Vimu6g00663 510 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 206 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vimu6g00663 510 Coils Coil 366 386 - -
Vimu6g00663 510 MobiDBLite consensus disorder prediction 378 471 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00663 - - gmx:100793888 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00663 6 7764000 7769182 Vimu6g00663 6 7764000 7769182 ECH